Environmental Health - Toxic Substances Hydrology Program

Technical Review Papers and Literature Review Papers

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This section of the bibliography has 369 publications
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A

Aiken, G., Hsu-Kim, H., Ryan, J., and Alvarez, P., 2011, Guest comment--Nanoscale metal-organic matter interactions: Environmental Science and Technology, v. 45, no. 8, p. 3194-3195, doi:10.1021/es2007148.

Aiken, G.R., 2002, Organic matter in ground water, in Aiken, G.R., and Kuniansky, E.L., eds., U.S. Geological Survey Artificial Recharge Workshop Proceedings, Sacramento, California, April 2-4, 2002: U.S. Geological Survey Open-File Report 02-89, p. 21-23.

Aiken, G.R., Hsu-Kim, H., and Ryan, J.N., 2011, Influence of dissolved organic matter on the environmental fate of metals, nanoparticles, and colloids: Environmental Science and Technology, v. 45, no. 8, p. 3196-3201, doi:10.1021/es103992s.

Anderson, D.E., 1999, Solutions to questions (chapter 9), in Tindall, J.A., and Kunkel, J.R., eds., Instructor's Solution Manual for Unsaturated Zone Hydrology for Scientists and Engineers: Englewood Cliffs, New Jersey, Prentice Hall, p. 40-47.

Anderson, D.E., 1999, Transport of heat and gas in soil and at the surface, in Tindall, J.A., and Kunkel, J.R., eds., Unsaturated Zone Hydrology for Scientists and Engineers (chapter 9): Englewood Cliffs, New Jersey, Prentice-Hall, p. 200-272.

Antweiler, R.C., Goolsby, D.A., and Taylor, H.E., 1996, Nutrients in the Mississippi River, 1987-92, in Meade, R.H., ed., Contaminants in the Mississippi River: U.S. Geological Survey Circular 1133, p. 73-85.

B

Bachman, R.W., Cloern, J.E., Hecky, R.E., and Schindler, D.W., 2006, Eutrophication of freshwater and marine ecosystems: Limnology and Oceanography, v. 51, no. 1, part 2, p. 351-800 (Speical Issue).

Back, W., Landa, E.R., and Meeks, L., 1995, Bottled water, spas, and early years of water chemistry: Ground Water, v. 33, no. 4, p. 605-614, doi:10.1111/j.1745-6584.1995.tb00316.x.

Baedecker, M.J., Back, W., and Cravotta III, C.A., 1994, Consequences of energy use on water, in Carter, L.M.H., ed., Tenth V.E. McKelvey Forum, Energy and the Environment - Application of geosciences to decision making: U.S. Geological Survey Circular 1108, p. 34-36.

Baedecker, M.J., and Cozzarelli, I.M., 1992, The determination and fate of unstable constituents of contaminated groundwater, in Lesage, S., and Jackson, R.E., eds., Groundwater contamination and analysis at hazardous waste sites: New York, Marcel Dekker, Inc., p. 425-462.

Baehr, A.L., Kauffman, L.J., Charles, E.G., Baker, R.J., Stackelberg, P.E., Ayers, M.A., and Zapecza, O.S., 1999, Sampling throughout the hydrologic cycle to characterize sources of volatile organic compounds in ground water, in Morganwalp, D.W., and Buxton, H.T., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the Technical Meeting, Charleston, South Carolina, March 8-12, 1999--Volume 3 of 3--Subsurface Contamination from Point Sources: U.S. Geological Survey Water-Resources Investigations Report 99-4018C, p. 21-35.

Baker, R.J., 1995, In situ and on-site biodegradation of refined and fuel oils--A review of technical literature 1988-1991: American Petroleum Institute publication number 4627, 146 p.

Barber, L.B., 2014, Emerging contaminants, in Ahuja, S., ed., Comprehensive Water Quality and Purification: Waltham, Mass., Elsevier, v. 1, p. 245-266, ISBN:9780123821829.

Barber, L.B., 2013, Emerging contaminants, in Ahuja, S., ed., Comprehensive Water Quality and Purification: Elsevier, v. 1, p. 245-266, ISBN:9780123821829.

Barber, L.B., II, Leenheer, J.A., Pereira, W.E., Noyes, T.I., Brown, G.K., Tabor, C.F., and Writer, J.H., 1995, Organic contamination of the Mississippi River from municipal and industrial wastewater, in Meade, R.H., ed., Contaminants in the Mississippi River, 1987-1992: U.S. Geological Survey Circular 1133, p. 115-135.

Barnett, M.O., and Kent, D.B., eds., 2008, Adsorption of Metals by Geomedia II--Variables, Mechanisms, and Model Applications: Amsterdam, Elsevier, Developments in earth and environmental sciences, v. 7, 474 p., ISBN:978-0-444-53212-1,

Barnett, T.P., Pierce, D.W., Hidalgo, H.G., Bonfils, C., Santer, B.D., Das, T., Bala, G., Wood, A.W., Nozawa, T., Mirin, A.A., Cayan, D.R., and Dettinger, M.D., 2008, Human-induced changes in the hydrology of the western United States: Science, v. 319, no. 5866, p. 1080-1083, doi:10.1126/science.1152538.

Battaglin, W.A., and Kolok, A., 2014, Featured collection introduction--Contaminants of emerging concern II: JAWRA Journal of the American Water Resources Association, v. 50, no. 2, p. 261-265, doi:10.1111/jawr.12176.

Bekins, B., Rittmann, B.E., and MacDonald, J.A., 2001, Natural attenuation strategy for groundwater cleanup focuses on demonstrating cause and effect: Eos, v. 82, no. 5, p. 53, 57-58.

Bekins, B.A., Baehr, A.L., Cozzarelli, I.M., Essaid, H.I., Haack, S.K., Harvey, R.W., Shapiro, A.M., Smith, J.A., and Smith, R.L., 1999, Capabilities and challenges of natural attenuation in the subsurface--Lessons from the U.S. Geological Survey Toxic Substances Hydrology Program, in Morganwalp, D.W., and Buxton, H.T., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the Technical Meeting, Charleston, South Carolina, March 8-12, 1999--Volume 3 of 3--Subsurface Contamination from Point Sources: U.S. Geological Survey Water-Resources Investigations Report 99-4018C, p. 37-56.

Bekins, B.A., Cozzarelli, I.M., Erickson, M.L., Steenson, R.A., and Thorn, K.A., 2016, Crude oil metabolites in groundwater at two spill sites: Groundwater, v. 54, no. 5, p. 681-691, doi:10.1111/gwat.12419 (pdf).

Bencala, K.E., 2010, Stream-groundwater interactions, in Wilderer, P.A., ed., Treatise on Water Science: Elsevier, v. 2 - Hydrology, Uhlenbrook, S., Ed., ISBN:978-0-444-53193-3.

Bencala, K.E., 2005, Hyporheic exchange flows, in Anderson, M.G., and McDonnell, J.J., eds., Encyclopedia of Hydrological Sciences: New Jersey, John Wiley and Sons, v. 3, Chapter 113, p. 1,733-1,740.

Bencala, K.E., Duff, J.H., Harvey, J.W., Jackman, A.P., and Triska, F.J., 1993, Modelling within the stream-catchment continuum, in Jakeman, A.J., Beck, M.B., and McAleer, J.J., eds., Modelling Change in Environmental Systems: Wiley, p. 163-187.

Bencala, K.E., Hamilton, D.B., and Petersen, J.H., 2006, Science for maintaining riverine ecosystems--Actions for the USGS identified in the workshop "Analysis of Flow and Habitat for Aquatic Communities": U.S. Geological Survey Open-File Report 2006-1256, 13 p.

Bexfield, L.M., and Plummer, L.N., 2003, Occurrence of arsenic in ground water of the Middle Rio Grande Basin, central New Mexico, in Welch, A.H., and Stollenwerk, K.G., eds., Arsenic in Ground Water--Geochemistry and Occurrence: Boston, Kluwer Academic Publishers, p. 295-327.

Bhattacharya, P., Welch, A.H., Stollenwerk, K.G., McLaughlin, M.J., Bundschuh, J., and Panaullah, G., 2007, Arsenic in the environment--Biology and chemistry: Science of the Total Environment, v. 379, no. 2-3, p. 109-120, doi:10.1016/j.scitotenv.2007.02.037 (Arsenic in the Environment, Biology and Chemistry--Arsenic in the Environment Special Issue, Bhattacharya, P., Welch, A.H., Stollenwerk, K.G., McLaughlin, M.J., Bundschuh, J., and Panaullah, G., eds.).

Bhattacharya, P., Welch, A.H., Stollenwerk, K.G., McLaughlin, M.J., Bundschuh, J., and Panaullah, G., eds., 2007, Arsenic in the environment--Biology and chemistry--Arsenic in the environment special issue: Amsterdam, Elsevier, Science of the Total Environment, v. 379, no. 2-3, 157 p.

Bjerg, P.L., Albrechtsen, H.J., Kjeldsen, P., Christensen, T.H., and Cozzarelli, I.M., 2014, The biogeochemistry of contaminant groundwater plumes arising from waste disposal facilities (Chapter 11.16), in Lollar, B.S., ed., Environmental Geochemistry, in Holland, H.D. and Turekian, Karl K., eds. Treatise on Geochemistry (2nd ed.): Oxford, Elsevier, v. 11, p. 573-605, ISBN:978-0-08-098300-4.

Bjerg, P.L., Albrechtsen, H.J., Kjeldsen, P., Christensen, T.H., and Cozzarelli, I.M., 2003, The groundwater geochemistry of waste disposal facilities (chapter 16), in Lollar, B.S., ed., Treatise on Geochemistry: Elsevier, v. 9 of 10 volumes, p. 579-612, ISBN:9780080437514.

Böhlke, J.K., de Laeter, J.R., De Bievre, P., Hidaka, H., Peiser, H.S., Rosman, K.J., and Taylor, P.D., 2005, Isotopic compositions of the elements, 2001: Journal of Physical and Chemical Reference Data, v. 34, no. 1, p. 57-67, doi:10.1063/1.1836764.

Bond, D.L., Davis, J.A., and Zachara, J.M., 2008, Uranium(VI) release from contaminated vadose zone sediments--Estimation of potential contributions from dissolution and desorption, in Barnett, M.O., and Kent, D.B., eds., Adsorption of Metals by Geomedia II--Variables, Mechanisms, and Model Applications: Amsterdam, Elsevier, v. 375-416, p. 474, ISBN:978-0-444-53212-1.

Bove, D.J., Lowers, H.A., Plumlee, G.S., and Verplanck, P.L., 2008, In-situ acid weathering reactions in areas affected by large-scale and pervasive hydrothermal alteration in the Southern Rocky Mountains (Chapter C), in Verplanck, P.L., ed., Understanding Contaminants Associated with Mineral Deposits: U.S. Geological Survey Circular 2008-1328, p. 14-17.

Bowell, R., Alpers, C.N., Jamieson, H.E., Nordstrom, D.K., and Majzlan, J., eds., 2014, Arsenic--Environmental geochemistry, mineralogy, and microbiology, in Reviews in Mineralogy and Geochemistry: Mineralogical Society of America and Geochemical Society, Reviews in Mineralogy and Geochemistry, v. 79, 635 p., ISBN:9780939950942,

Bowell, R.J., Alpers, C.N., Jamieson, H.E., Nordstrom, D.K., and Majzlan, J., 2014, The environmental geochemistry of arsenic--An overview, in Bowell, R., and others, eds., Arsenic: Environmental Geochemistry, Mineralogy, and Microbiology--Reviews in Mineralogy and Geochemistry: Chantilly, Virginia, Mineralogical Society of America Geochemical Society, v. 79, p. 1-16.

Bowen, G.J., West, J.B., Vaughn, B.H., Dawson, T.E., Ehleringer, J.R., Fogel, M.L., Hobson, K., Hoogewerff, J., Kendall, C., Lai, C.T., Miller, C.C., Noone, D., Schwarcz, H., and Still, C.J., 2009, Isoscapes to address large-scale earth science challenges: Eos, v. 90, no. 13, p. 109-110, doi:10.1029/2009EO130001.

Boxall, A.B.A., Kolpin, D.W., Halling-Sorensen, B., and Tolls, J., 2003, Are veterinary medicines causing environmental risks?: Environmental Science and Technology, v. 37, no. 15, p. 286A-294A, doi:10.1021/es032519b.

Boxall, A.B.A., Sinclair, C.J., and Kolpin, D.W., 2006, Potential risks of pesticide degradates to aquatic life, in Gilliom, R.J., and others, eds., Pesticides in the nation's streams and ground water, 1992-2001: U.S. Geological Survey Circular 1291, p. 81-86.

Bradford, S.A., and Harvey, R.W., 2016, Future research needs involving pathogens in groundwater: Hydrogeology Journal, p. 1-8, doi:10.1007/s10040-016-1501-0 (Advanced Web release).

Bradford, S.A., Morales, V.L., Zhang, W., Harvey, R.W., Packman, A.I., Mohanram, A., and Welty, C., 2013, Transport and fate of microbial pathogens in agricultural settings: Critical Reviews in Environmental Science and Technology, v. 43, no. 8, p. 775-893, doi:10.1080/10643389.2012.710449.

Bradley, P.M., 2012, Perils of categorical thinking--“Oxic/anoxic” conceptual model in environmental remediation: Remediation Journal, v. 22, no. 3, p. 9-18, doi:10.1002/rem.21317.

Bradley, P.M., 2011, Reinterpreting the importance of oxygen-based biodegradation in chloroethene-contaminated groundwater: Ground Water Monitoring and Remediation, v. 31, no. 4, p. 50-55, doi:10.1111/j.1745-6592.2011.01344.x.

Bradley, P.M., 2003, History and ecology of chloroethene biodegradation--A review: Bioremediation Journal, v. 7, no. 2, p. 81-109, doi:10.1080/10889860390246141.

Bradley, P.M., 2000, Microbial degradation of chloroethenes in groundwater systems: Hydrogeology Journal, v. 8, no. 1, p. 104-111, doi:10.1007/s100400050011.

Bradley, P.M., and Chapelle, F.H., 2010, Biodegradation of chlorinated ethenes (Chap. 3), in Stroo, H.F., and Ward, C.H., eds., In Situ Remediation of Chlorinated Solvent Plumes: Springer New York, p. 39-67, ISBN:978-1-4419-1401-9.

Bradley, P.M., and Chapelle, F.H., 2007, Accumulation of dechlorination daughter products--A valid metric of chloroethene biodegradation: Remediation Journal, v. 17, no. 4, p. 7-22, doi:10.1002/rem.20140.

Bradley, P.M., Chapelle, F.H., and Löffler, F.E., 2008, Anoxic mineralization--Environmental reality or experimental artifact?: Ground Water Monitoring and Remediation, v. 28, no. 1, p. 47-49, doi:10.1111/j.1745-6592.2007.00186.x.

Bradley, P.M., and Kolpin, D.W., 2013, Managing the effects of endocrine disrupting chemicals in wastewater-impacted streams (Chapter 1), in Bradley, P.M., ed., Current Perspectives in Contaminant Hydrology and Water Resources Sustainability: New York, InTech, ISBN:9789535110460.

Bradley, P.M., and Morganwalp, D.W., 2013, Rethinking the limits of oxygen-based biodegradation--More oxygen than we think: U.S. Geological Survey, access date 10/20/2016, 2016

Bradley, P.M., ed., 2013, Current perspectives in contaminant hydrology and water resources sustainability: New York, InTech, 333 p., ISBN:9789535110460,

Bredehoeft, J.D., and Konikow, L.F., 1993, Ground-water models--Validate or invalidate: Ground Water, v. 31, no. 2, p. 178-179, doi:10.1111/j.1745-6584.1993.tb01808.x.

Brenner, I.B., and Taylor, H.E., 1992, A critical review of inductively coupled plasma-mass spectrometry for geoanalysis, geochemistry and hydrology, Part 1, Analytical performance: Critical Reviews in Analytical Chemistry, v. 11, p. 452-463, doi:10.1080/10408349208051650.

Bricker, O.P., Bowser, C.J., and Jones, B.F., 2003, Mass balance approach to interpreting weathering reactions in watershed systems (chapter 4), in Drever, J.I., ed., Treatise on Geochemistry: Elsevier, v. 5 of 10 volumes, p. 119-132, ISBN:9780080437514.

Bricker, O.P., and Jones, B.F., 1995, Main factors affecting the composition of natural waters, in Steines, E., and Salbu, B., eds., Trace metals in the environment: CRC Press, p. 1-19.

Bullen, T.D., and Kendall, C., 1998, Tracing of weathering reactions and water flowpaths--A multi-isotope approach, in Kendall, C., and McDonnell, J.J., eds., Isotope Tracers in Catchment Hydrology: Amsterdam, Elsevier, p. 611-646.

Buxton, H.T., 2008, Pharmaceutical in the environment--What we know and need to know, in 2008 Summit--Pharmaceuticals in Water--What We Know, Don’t Know, and Should Do, Research Triangle Park, N.C., November 10-11, 2008: Durham, N.C., Research Triangle Environmental Health Collaborative, p. 5 (Presentation slides).

C

Caine, J.S., Manning, A.H., Philip L. Verplanck, Bove, D.J., Kahn, K.G., and Ge, S., 2008, U.S. Geological Survey Research in Handcart Gulch, Colorado--An alpine watershed affected by metalliferous hydrothermal alteration (Chapter I), in Verplanck, P.L., ed., Understanding Contaminants Associated with Mineral Deposits: U.S. Geological Survey Circular 2008-1328, p. 50-57.

Callender, E., 2003, Heavy metals in the environment--Historical trends (chapter 3), in Lollar, B.S., ed., Treatise on Geochemistry: Elsevier, v. 9 of 10 volumes, p. 67-105, ISBN:9780080437514.

Campbell, K.M., and Nordstrom, D.K., 2014, Arsenic speciation and sorption in natural environments, in Bowell, R., and others, eds., Arsenic: Environmental Geochemistry, Mineralogy, and Microbiology--Reviews in Mineralogy and Geochemistry: Chantilly, Virginia, Mineralogical Society of America Geochemical Society, v. 79, p. 185-216.

Capel, P.D., 1990, A bibliography of atrazine and its simple degradation products in the environment: U.S. Geological Survey Open-File Report 89-613, 4 diskettes, 5 p.

Caruso, B.S., Cox, T.J., Runkel, R.L., Velleux, M.L., Bencala, K.E., Nordstrom, D.K., Julien, P.Y., Butler, B.A., Alpers, C.N., Marion, A., and Smith, K.S., 2008, Metals fate and transport modelling in streams and watersheds--State of the science and USEPA workshop review: Hydrologic Processes, v. 22, no. 19, p. 4011-4021, doi:10.1002/hyp.7114.

Chapelle, F.H., 2003, Geochemistry of ground water (chapter 14), in Drever, J.I., ed., Treatise on Geochemistry: Elsevier, v. 5 of 10 volumes, p. 425-449, ISBN:9780080437514.

Chapelle, F.H., 2001, Ground-water microbiology and geochemistry (2nd ed.): New York, John Wiley and Sons, 477 p.

Chapelle, F.H., 2000, The significance of microbial processes in hydrogeology and geochemistry: Hydrogeology Journal, v. 8, no. 1, p. 41-46, doi:10.1007/PL00010973.

Chapelle, F.H., 1999, Bioremediation of petroleum hydrocarbon-contaminated ground water--The perspectives of history and hydrogeology: Ground Water, v. 37, no. 1, p. 122-132, doi:10.1111/j.1745-6584.1999.tb00965.x.

Chapelle, F.H., 1993, Ground-water microbiology and geochemistry: New York, John Wiley and Sons, 424 p.

Chapelle, F.H., 1987, The role of geochemical processes in hazardous-waste studies, in Ragone, S.E., and Sulam, D., eds., Program overview and selected papers from the Toxic-Waste Program technical meeting--Tucson, Arizona, March 20-22, 1984: U.S. Geological Survey Open-File Report 86-324, p. 9-19.

Chapelle, F.H., and Bradley, P.M., 1999, Selecting remediation goals by assessing the natural attenuation capacity of ground-water systems, in Morganwalp, D.W., and Buxton, H.T., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the Technical Meeting, Charleston, South Carolina, March 8-12, 1999--Volume 3 of 3--Subsurface Contamination from Point Sources: U.S. Geological Survey Water-Resources Investigations Report 99-4018C, p. 7-19.

Chapelle, F.H., and Bradley, P.M., 1998, Selecting remediation goals by assessing the natural attenuation capacity of ground-water systems: Bioremediation Journal, v. 2, no. 3-4, p. 227-238.

Chapelle, F.H., Bradley, P.M., McMahon, P.B., and Lindsey, B.D., 2009, What does "water quality" mean?: Ground Water, doi:10.1111/j.1745-6584.2009.00569.x.

Chapelle, F.H., Campbell, B.G., Widdowson, M.A., and Landon, M.K., 2013, Modeling the long-term fate of agricultural nitrate in groundwater in the San Joaquin Valley, California (Chapter 6), in Bradley, P.M., ed., Current Perspectives in Contaminant Hydrology and Water Resources Sustainability: New York, InTech, ISBN:9789535110460.

Chapelle, F.H., Ellis, D.E., Nyer, E.K., Lovelace, K.A., and Rittmann, B.E., 2003, Monitored natural attenuation forum--A panel discussion: Remediation Journal, v. 13, no. 3, p. 113-121, doi:10.1002/rem.10079.

Chernoff, N., Hill, D.J., Diggs, D.L., Faison, B.D., Francis, B.M., Lang, J.R., Larue, M.M., Le, T.-T., Loftin, K.A., Lugo, J.N., Schmid, J.E., and Winnik, W.M., 2017, A critical review of the postulated role of the non-essential amino acid, β-N-methylamino-l-alanine (BMAA) in neurodegenerative disease in humans: Journal of Toxicology and Environmental Health--Part B (Critical Reviews), v. 20, no. 4, p. 1-47, doi:10.1080/10937404.2017.1297592 (Advanced Web release).

Chiou, C.T., 2002, Partition and adsorption of organic contaminants in environmental systems: New York, John Wiley and Sons, Inc., 257 p., ISBN:0-471-23325-0.

Choate, L.M., Ranville, J.F., Blumenstein, E.P., and Smith, K.S., 2008, Simple screening tests to determine the potential metal toxicity of mining-waste leachates (Chapter E), in Verplanck, P.L., ed., Understanding Contaminants Associated with Mineral Deposits: U.S. Geological Survey Circular 2008-1328, p. 24-27.

Church, S.E., Owen, J.R., von Guerard, P., Verplanck, P.L., Kimball, B.A., and Yager, D.B., 2007, The effects of acidic mine drainage from historical mines in the Animas River watershed, San Juan County, Colorado--What is being done and what can be done to improve water quality?, in DeGraff, J.V., ed., Understanding and responding to hazardous substances at mine sites in the western United States: Boulder, Colo., Geological Society of America, p. 47-83, ISBN:9780813741178.

Church, S.E., Von Guerard, P., and Finger, S.E., Eds, 2007, Integrated investigations of environmental effects of historical mining in the animas river watershed, San Juan County, Colorado: U.S. Geological Survey Professional Paper 1651, 1096 p (2 volumes).

Cloern, J., and Hanak, E., 2013, It's time for bold new approaches to link delta science and policymaking: San Francisco Estuary and Watershed Science, v. 11, no. 3, doi:10.15447/sfews.2013v11iss3art6.

Cloern, J., Krantz, T., and Duffy, J.E., 2006, Eutrophication, in Cleveland, C.J., ed., Encyclopedia of Earth: Washington, D.C., Environmental Information Coalition, National Council for Science and the Environment (online only).

Cloern, J.E., 2013, Changing perspectives on how scientists should allocate our most precious resource--Time--AGU blogosphere--The plainspoken scientist--May 1, 2013: American Geophysical Union, access date September 12, 2013

Cloern, J.E., 2001, Our evolving conceptual model of the coastal eutrophication problem: Marine Ecology Progress Series, v. 210, p. 223-253, doi:10.3354/meps210223.

Cloern, J.E., 1996, Phytoplankton bloom dynamics in coastal ecosystems--A review with some general lessons from sustained investigation of San Francisco Bay, California: Reviews of Geophysics, v. 34, no. 2, p. 127-168, doi:10.1029/96RG00986.

Cloern, J.E., and Dufford, R., 2005, Phytoplankton community ecology--Principles applied in San Francisco Bay: Marine Ecology Progress Series, v. 285, p. 11-28, doi:10.3354/meps285011.

Cloern, J.E., Foster, S.Q., and Kleckner, A.E., 2013, Review--Phytoplankton primary production in the world's estuarine-coastal ecosystems: Biogeosciences, v. 10, no. 11, p. 17725-17783, doi:10.5194/bgd-10-17725-2013 (Interactive discussion - Status closed).

Cloern, J.E., and Jassby, A.D., 2012, Drivers of change in estuarine-coastal ecosystems--Discoveries from four decades of study in San Francisco Bay: Reviews of Geophysics, v. 50, no. 4, doi:10.1029/2012RG000397.

Cloern, J.E., Jassby, A.D., Schraga, T.S., and Dallas, K.L., 2006, What is causing the phytoplankton increase in San Francisco Bay?, in The Pulse of the Estuary -- Monitoring and managing water quality in the San Francisco Estuary: Oakland, California, San Francisco Estuary Institute Annual Report 2006, p. 62-70.

Cozzarelli, I.M., and Baehr, A.L., 2003, Volatile fuel hydrocarbons and MTBE in the environment (chapter 12), in Lollar, B.S., ed., Treatise on Geochemistry: Elsevier, v. 9 of 10 volumes, p. 433-474, ISBN:9780080437514.

Cozzarelli, I.M., McKelvie, J.R., and Baehr, A.L., 2014, Volatile fuel hydrocarbons and oxygenates in the environment (Chapter 11.12), in Lollar, B.S., ed., Environmental Geochemistry, in Holland, H.D. and Turekian, Karl K., eds. Treatise on Geochemistry (2nd ed.): New York, Elsevier Science, v. 11, p. 439-480, ISBN:9780080959757.

Cozzarelli, I.M., and Weiss, J.V., 2007, Biogeochemistry of aquifer systems, in Hurst, C.J., and others, eds., Manual of Environmental Microbiology (3rd ed.): Washington, D.C., ASM Press, v. VI, ISBN:978-1-55581-379-6.

Croué, J.P., DeBroux, J.F., Amy, G.L., Aiken, G.F., and Leenheer, J.A., 1999, Natural organic matter--Structural characteristics and reactive properties, in Singer, P.C., ed., Formation and control of disinfection by-products in drinking water: Denver, American Water Works Association, p. 65-93.

D

Davis, J.A., and Hayes, K.F., 1986, Geochemical processes at mineral surfaces--An overview, in Davis, J.A., and Hayes, K.F., eds., Geochemical processes at mineral surfaces: Washington, D.C., American Chemical Society ACS Symposium Series 323, p. 2-18.

Davis, J.A., and Kent, D.B., 1990, Surface complexation modeling in aqueous geochmeistry, in Hochella, M.F., and White, A.F., eds., Mineral-water interface geochemistry--Reviews in mineralogy: Mineralogical Society of America, v. 23, p. 177-260.

Davis, J.A., Yabusaki, S.B., Steefel, C.I., Zachara, J.M., Curtis, G.P., Redden, G.P., Criscenti, L.J., and Honeyman, B.D., 2004, Assessing conceptual models for subsurface reactive transport of inorganic contaminants: Eos, v. 85, no. 44, p. 449-455, doi:10.1029/2004EO440002.

de Laeter, J.R., Böhlke, J.K., De Bievre, P., Hidaka, H., Peiser, H.S., Rosman, K.J.R., and Taylor, P.D.P., 2003, Atomic weights of the elements--Review 2000 (IUPAC Technical Report): Pure and Applied Chemistry, v. 75, no. 6, p. 683-800, doi:10.1351/pac200375060683.

de la Cruz, A.A., Hiskia, A., Kaloudis, T., Chernoff, N., Hill, D., Antoniou, M.G., He, X., Loftin, K., O'Shea, K., Zhao, C., Pelaez, M., Han, C., Lynch, T.J., and Dionysiou, D.D., 2013, A review on cylindrospermopsin--The global occurrence, detection, toxicity and degradation of a potent cyanotoxin: Environmental Science--Processes and Impacts, v. 15, no. 11, p. 1979-2003, doi:10.1039/C3EM00353A.

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Shanley, J.B., Pendall, E., Kendall, C., Stevens, L.R., Michel, R.L., Phillips, P.J., Forester, R.M., Naftz, D.L., Liu, B., Stem, L., Wolfe, B.B., Chamberlain, C.P., Leavitt, S.W., Heaton, T.H.E., Mayer, B., Cecil, L.D., Lyons, W.B., Katz, B.G., Betancourt, J.L., McKnight, D.M., Blum, J.D., Edwards, T.W.D., House, H.R., Ito, E., Aravena, R.O., and Whelan, J.F., 1998, Isotopes as indicators of environmental change, Chapter 22, in Kendall, C., and McDonnell, J.J., eds., Isotope tracers in catchment hydrology: Amsterdam, Elsevier, p. 761-816.

Shapiro, A., 2011, The challenge of interpreting environmental tracer concentrations in fractured rock and carbonate aquifers: Hydrogeology Journal, v. 19, no. 1, p. 9-12, doi:10.1007/s10040-010-0678-x.

Shapiro, A.M., 2007, Publishing Our "Ugly Babies": Ground Water, v. 45, no. 6, p. 655-655, doi:10.1111/j.1745-6584.2007.00351.x.

Shapiro, A.M., and Hsieh, P.A., 1996, Overview of research on use of hydrologic, geophysical, and geochemical methods to characterize flow and chemical transport in fractured rock at the Mirror Lake site, New Hampshire, in Morganwalp, D.W., and Aronson, D.A., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the technical meeting, Colorado Springs, Colorado, September 20-24, 1993: U.S. Geological Survey Water-Resources Investigations Report 94-4015, v. 1, p. 71-80.

Shapiro, A.M., Hsieh, P.A., Burton, W.C., and Walsh, G.J., 2007, Integrated multi-scale characterization of ground-water flow and chemical transport in fractured crystalline rock at the Mirror Lake Site, New Hampshire, in Hyndman, D.W., Day-Lewis, F.D., and Singha, K., eds., Subsurface Hydrology--Data Integration for Properties and Processes: Washington, D.C., American Geophysical Union, Geophysical Monograph Series, p. 201-225, ISBN:978-0-87590-437-5.

Shapiro, S.D., Busenberg, E., Focazio, M.J., and Plummer, L.N., 2004, Historical trends in occurrence and atmospheric inputs of halogenated volatile organic compounds in untreated ground water used as a source of drinking water: Science of the Total Environment, v. 321, no. 1-3, p. 201-217, doi:10.1016/j.scitotenv.2003.09.007.

Sigleo, A.C., 1987, An overview of organic compounds in ground water, in Ragone, S.E., and Sulam, D.J., eds., Program overview and selected papers from the Toxic-Waste Program technical meeting--Tucson, Arizona, March 20-22, 1984: U.S. Geological Survey Open-File Report 86-324, p. 21-36.

Singha, K., Day-Lewis, F.D., and Moyse, S., 2007, Accounting for tomographic resolution in estimating hydrologic properties from geophysical data, in Hyndman, D.W., Day-Lewis, F.D., and Singha, K., eds., Subsurface Hydrology--Data Integration for Properties and Processes: Washington, D.C., American Geophysical Union, Geophysical Monograph Series, p. 227-242, ISBN:978-0-87590-437-5.

Smetacek, V., and Cloern, J.E., 2008, Oceans--On phytoplankton trends: Science, v. 319, no. 5868, p. 1346-1348, doi:10.1126/science.1151330.

Smith, J.A., Witkowski, P.J., and Chiou, C.T., 1988, Partition of nonionic organic compounds in aquatic systems: Reviews of Environmental Contamination and Toxicology, v. 39, p. 465-473.

Smith, J.A., Witkowski, P.J., and Fusillo, T.V., 1987, Manmade organic compounds in the surface waters of the United States--A review of current understanding: U.S. Geological Survey Circular 1007, 92 p.

Smith, K.S., McLemore, V.T., and C.C., R., 2014, Sampling considerations in the mining environment (Chapter 3), in McLemore, V.T., Smith, K.S., and Russell, C.C., eds., Sampling and Monitoring for the Mine Life Cycle--Management Technologies for Metal Mining Influenced Water: Englewood, Colo., Society for Mining, Metallurgy, and Exploration, Inc.

Smith, R.L., 2002, Determining the terminal electron-accepting reaction in the saturated subsurface, in Hurst, C.J., and others, eds., Manual of Environmental Microbiology (2nd ed.): Washington, D.C., ASM Press, p. 743-752.

Smith, R.L., 1997, Determining the terminal electron-accepting reaction in the saturated subsurface, in Hurst, C.J., and others, eds., Manual of Environmental Microbiology: Washington, D.C., ASTM Press, p. 577-585.

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Stannard, D.I., Kustas, W.P., Allwine, K.J., and Anderson, D.E., 1993, Chapter V., Micrometeorological data collection, in Jackson, T.J., and Schiebe, F.R., eds., Hydrology Data Report--Washita '92: Agricultural Research Service National Agricultural Water Quality Laboratory Report 93-1, p. V1-V11.

Stollenwerk, K.G., 2003, Geochemical processes controlling transport of arsenic in groundwater--A review of adsorption, in Welch, A.H., and Stollenwerk, K.G., eds., Arsenic in ground water--Geochemistry and occurrence: Boston, Kluwer Academic Publishers, p. 67-100.

Stollenwerk, K.G., and Colman, J.A., 2003, Natural remediation potential of arsenic-contaminated ground water, in Welch, A.H., and Stollenwerk, K.G., eds., Arsenic in Groundwater--Geochemistry and Occurrence: Boston, Kluwer Academic Press, p. 351-379.

Stolz, J.F., Basu, P., and Oremland, R.S., 2010, Microbial arsenic metabolism--New twists on an old poison: Microbe, v. 5, no. 2, p. 53-59.

Stolz, J.F., Basu, P., and Oremland, R.S., 2002, Microbial transformation of elements--The case of arsenic and selenium: International Microbiology, v. 5, p. 210-205, doi:10.1007/s10123-002-0091-y.

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Stolz, J.F., Oremland, R.S., Paster, B.J., Dewhirst, F.E., and Vandamme, P., 2005, Genus Sulfurospirillum, in Brenner, D.J., Krieg, N.R., and Staley, J.T., eds., Gergey's Manual of Systematic Bacteriology, Part Two--The Proteobacteria, Part C--The Alpha-, Beta, Delta-, and Epsilonproteobacteria (2nd ed.): New York, Springer, p. 1165-1168, ISBN:978-0-387-95040-2.

Stolz, J.F., and Oremland, R.S., eds., 2011, Microbial metal and metalloid metabolism--Advances and applications: Washington, D.C., ASM Press, 420 p., ISBN:978-1-55581-536-3,

Stonestrom, D.A., 2016, Groundwater, in Wohl, E., ed., Oxford Bibliographies in Environmental Science: New York, Oxford University Press, p. 1-39.

Stonestrom, D.A., 2014, Book review--"Terrestrial biosphere-atmosphere fluxes and transport in the atmosphere-vegetation-soil continuum": Groundwater, v. 52, no. 6, p. 817-818, doi:10.1111/gwat.12270.

Stonestrom, D.A., 2011, Estimating groundwater recharge, by Richard W. Healy (Book Review): EOS, Transactions American Geophysical Union, v. 92, no. 32, p. 269, doi:10.1029/2011eo320008.

Stonestrom, D.A., Constantz, J., and Ferre, T.P.A., eds.,, 2007, Ground-water recharge in the arid and semiarid southwestern United States: U.S. Geological Survey Professional Paper 1703, 414 p.

Sturchio, N.C., Böhlke, J.K., Gu, B., Hatzinger, P.B., and Jackson, W.A., 2011, Isotopic tracing of perchlorate in the environment, in Baskaran, M., ed., Handbook of Environmental Isotope Geochemistry (Part 2), Advances in Isotope Geochemistry: Berlin Heidelberg, Springer-Verlag, p. 437-452, ISBN:978-3-642-10637-8.

Suflita, J.M., Londry, K.L., and Ulrich, G.A., 1996, The determination of anaerobic biodegradation activity, in Hurst, C.J., and others, eds., Manual of Environmental Microbiology: Washington, D.C., American Society for Microbiology, p. 790-801.

Swayze, G.A., Desborough, G.A., Smith, K.S., Heather A. Lowers, Hammarstrom, J.M., Diehl, S.F., Leinz, R.W., and Driscoll, R.L., 2008, Understanding jarosite--From mine waste to Mars (Chapter B), in Verplanck, P.L., ed., Understanding Contaminants Associated with Mineral Deposits: U.S. Geological Survey Circular 2008-1328, p. 8-13.

T

Talma, A.S., Weaver, J.M.C., Plummer, L.N., and Busenberg, E., 2000, CFC tracing of groundwater in fractured rock aided with 14C and 3H to identify water mixing, in Sililo, O., ed., Groundwater--Past achievements and future challenges: Rotterdam, A.A. Balkema, p. 635-640.

Taylor, H.E., and Garbarino, J.R., 1991, The measurement of trace metals in water resource monitoring samples by inductively-coupled plasma mass spectrometry: Spectrochimica Acta Reviews, v. 14, p. 33.

Thompson, B., Adelsbach, T., Brown, C., Hunt, J., Kuwabara, J., Neale, J., Ohlendorf, H., Schwarzbach, S., Spies, R., and Taberski, K., 2007, Biological effects of anthropogenic contaminants in the San Francisco Estuary: Environmental Research, v. 105, no. 1, p. 156-174, doi:10.1016/j.envres.2006.10.005.

Thompson, J.K., 2005, One estuary, one invasion, two responses--Phytoplankton and benthic community dynamics determine the effect of an estuarine invasive suspension-feeder, in Dame, R.F., and Olenin, S., eds., Comparative roles of suspension-feeders in ecosystems: The Netherlands, Springer Press, p. 291-316, ISBN:978-1-4020-3028-4.

Tindall, J.A., and Kunkel, J.R., 1999, Instructor's solution manual for unsaturated zone hydrology for scientists and engineers: Englewood Cliff, New Jersey, 160 p.

Tindall, J.A., and Kunkel, J.R., 1999, Unsaturated zone hydrology for environmental scientists and engineers: Englewood Cliff, New Jersey, Prentice-Hall, 625 p.

U

U.S. Environmental Protection Agency Modeling Project Subcommittee (Science Advisory Board), 1993, Review of the assessment framework for ground-water model applications: Environmental Protection Agency, 12 p.

U.S. Environmental Protection Agency, U.S. Geological Survey, and U.S. Fish and Wildlife Service, 2012, Toxic contaminants in the Chesapeake Bay and its watershed--Extent and severity of occurrence and potential biological effects--Technical Report--December, 2012: U.S. Environmental Protection Agency Chesapeake Bay Program Office, 175 p.

U.S. Geological Survey, 2002, Concepts for national assessment of water availability and use (Report to Congress): U.S. Geological Survey Circular 1223, 34 p.

V

Vandenhove, H., Verrezen, F., and Landa, E.R., 2010, Radium, in Atwood, E.A., ed., Radionuclides in the Environment: Chichester, UK, John Wiley and Sons, p. 97-108.

Vangelas, K.M., Looney, B.B., Early, T.O., Gilmore, T., Chapelle, F.H., Adams, K.M., and Sink, C.H., 2006, Monitored natural attenuation of chlorinated solvents--Moving beyond reductive dechlorination: Remediation Journal, v. 16, no. 3, p. 5-23, doi:10.1002/rem.20088.

Vengosh, A., Spivak, A.J., Johannesson, K.J., Lyons, W.B., Weaver, T.R., Morgenstern, U., Michel, R.L., and Rabryka-Martin, J., 1999, δ11B, Rare earth elements δ37Cl, 32Si, 35S, 129I, in Cook, P., and Herczeg, A.L., eds., Environmental Tracers in Subsurface Hydrology: Boston, Kluver Academic Publishers, p. 479-510.

Verplanck, P.L., ed., 2008, Understanding contaminants associated with mineral deposits: U.S. Geological Survey Circular 2008-1328, 96 p.

Versteeg, D.J., Alder, A.C., Cunningham, V.L., Kolpin, D.W., Murray-Smith, R., and Ternes, T., 2005, Environmental exposure modeling and monitoring of human pharmaceutical concentrations in the environment, in Williams, R.T., ed., Human pharmaceuticals - assessing the impacts on aquatic ecosystems: SETAC Press, p. 71-110, ISBN:978-1-880611-82-1.

Voss, C., 2011, Editor's message--Groundwater modeling fantasies--Part 1, Adrift in the details: Hydrogeology Journal, v. 19, no. 7, p. 1281-1284, doi:10.1007/s10040-011-0789-z.

Voss, C., 2011, Editor's message--Groundwater modeling fantasies--Part 2, Down to Earth: Hydrogeology Journal, v. 19, no. 8, p. 1455-1458, doi:10.1007/s10040-011-0790-6.

Voss, C., Olcott, P., and Schneider, R., 2004, Editors' message--Hydrogeology Journal in 2003: Hydrogeology Journal, v. 12, no. 1, p. 1-2, doi:10.1007/s10040-004-0418-1.

Voss, C., Olcott, P., Schneider, R., and Watson, C., 2004, Editors' Message--Hydrogeology Journal in 2004: Hydrogeology Journal, v. 12, no. 6, p. 611-612, doi:10.1007/s10040-004-0418-1.

Voss, C.I., 2005, Preface--The future of hydrogeology: Hydrogeology Journal, v. 13, no. 1, p. 1-6, doi:10.1007/s10040-005-0435-8.

Voss, C.I., 2003, Announcing a Hydrogeology Journal theme issue on "The Future of Hydrogeology": Hydrogeology Journal, v. 11, no. 4, p. 415-417, doi:10.1007/s10040-003-0284-2.

W

Walters, D.M., Jardine, T.D., Cade, B.S., Kidd, K.A., Muir, D.C.G., and Leipzig-Scott, P., 2016, Trophic magnification of organic chemicals--A global synthesis: Environmental Science and Technology, v. 50, no. 9, p. 4650-4658, doi:10.1021/acs.est.6b00201.

Walton-Day, K., and Kimball, B.A., 2014, St. Kevin Gulch Watershed Study Area, Colorado (Appendix 5 -- Case Studies of Sampling and Monitoring), in McLemore, V.T., Smith, K.S., and Russell, C.C., eds., Sampling and Monitoring for the Mine Life Cycle--Management Technologies for Metal Mining Influenced Water: Englewood, Colo., Society for Mining, Metallurgy, and Exploration, Inc.

Walvoord, M.A., 2005, Review of FEHM: Southwest Hydrology, v. 4, no. 6, p. 41.

Wanty, R.C., and Nordstrom, D.K., 1993, Natural radionuclides, in Alley, W.M., ed., Regional Ground-Water Studies: New York, Van Nostrand Reinhold, p. 423-441.

Watras, C.J., Bloom, N.S., Hudson, R.J.M., Gherini, S., Munson, R., Claas, S.A., Morrison, K.A., Hurley, J., Wiener, J.G., Fitzgerald, W.F., Mason, R., Vandal, G., Powell, D., Rada, R., Rislov, L., Winfrey, M., Elder, J., Krabbenhoft, D., Andren, A.W., Babiarz, C., Porcella, D.B., and Huckabee, J.W., 1994, Sources and fates of mercury and methylmercury in Wisconsin lakes, in Watras, C.J., and Huckabee, J.W., eds., Mercury pollution--Integration and synthesis: Boca Raton, Lewis Publishers, p. 153-177.

Webster, J.G., and Nordstrom, D.K., 2003, Geothermal arsenic, in Welch, A.H., and Stollenwerk, K.G., eds., Arsenic in ground water--Geochemistry and occurrence: Boston, Kluwer Academic Publishers, p. 101-125.

Weidhaas, J.L., Dietrich, A.M., DeYonker, N.J., Ryan Dupont, R., Foreman, W.T., Gallagher, D., Gallagher, J.E.G., Whelton, A.J., and Alexander, W.A., 2016, Enabling science support for better decision-making when responding to chemical spills: Journal of Environmental Quality, v. 45, no. 5, p. 1490-1500, doi:10.2134/jeq2016.03.0090.

Weiss, J.V., and Cozzarelli, I.M., 2008, Biodegradation in contaminated aquifers--Incorporating microbial/molecular methods: Ground Water, v. 46, no. 2, p. 305-322, doi:10.1111/j.1745-6584.2007.00409.x.

Welch, A.H., Stollenwerk, K.G., Maurer, D.K., and Feinson, L.S., 2003, In situ arsenic remediation in a fractured, alkaline aquifer, in Welch, A.H., and Stollenwerk, K.G., eds., Arsenic in ground water--Geochemistry and occurrence: Boston, Kluwer Academic Publishers, p. 403-419.

Welch, A.H., and Stollenwerk, K.G., eds., 2003, Arsenic in ground water--Geochemistry and occurrence: Boston, Kluwer Academic Publishers, 475 p., ISBN:978-1-4020-7317-5,

Wentz, D.A., Brigham, M.E., Chasar, L.C., Lutz, M.A., and Krabbenhoft, D.P., 2014, Mercury in the Nation's streams--Levels, trends, and implications: U.S. Geological Survey Circular 1395, 90 p.

Wershaw, R.L., 2000, The study of humic substances--In search of a paradigm, in Davies, G., and Ghabbour, E.A., eds., Humic substances--Versatile components of plants, soil, and water: Cambridge, England, Royal Society of Chemistry, p. 1-7.

White, A.F., 2003, Natural weathering rates of silicate minerals (chapter 5), in Drever, J.I., ed., Treatise on Geochemistry: Elsevier, v. 5 of 10 volumes, p. 133-168, ISBN:9780080437514.

White, A.F., 1995, Application of mineral surface area to environmental problems, in Reviews in Geophysics Supplement to U.S. National Report to International Union of Geodesy and Geophysics.

Wiener, J.G., Krabbenhoft, D.P., Heinz, G.H., and Scheuhammer, A.M., 2002, Ecotoxicology of mercury, in Hoffman, D.J., Rattner, B.A., Burton Jr., G.A., and Cairns Jr., J., eds., Handbook of Ecotoxicology (2nd ed.): Boca Raton, Florida, CRC Press, p. 407-461, ISBN:1566705460.

Wilson, J.T., Kampbell, D.H., Weaver, J.W., Wilson, B.H., Imbrigiotta, T.E., and Ehlke, T.A., 1995, A review of intrinsic bioremediation of TCE in ground water at Picatinny Arsenal, New Jersey and St. Joseph, Michigan, in Proceedings of the Symposium on Bioremediation of Hazardous Wastes--Research, Development, and Field Evaluations, Rye Brook, New York, August 8-10, 1995, Washington, D.C.: Office of Research and Development, U.S. Environmental Protection Agency, p. 13-16, ISBN:EPA/540/R-95/532.

Witkowski, P.J., Smith, J.A., Fusillo, T.V., and Chiou, C.T., 1987, A review of surface-water sediment fractions and their interactions with persistent manmade organic compounds: U.S. Geological Survey Circular 993, 39 p.

Wood, W.W., 2005, Nanobots--A new paradigm for hydrogeologic characterization?: Ground Water, v. 43, no. 4, p. 462, doi:10.1111/j.1745-6584.2005.0079.x.

Wright, D.L., and Nelson, P.H., 1993, Borehole dielectric logging for environmental applications--A review and a time-domain laboratory experiment, in Hallenburg, J.K., ed., Transactions of the 5th Annual Symposium, Minerals and Geotechnical Logging Society, Tulsa, Oklahoma, October 24-28, 1993: Tulsa, Okla., The Minerals and Geotechnical Logging Society, The Society of Professional Well Log Analysts, p. T1- T23.

Z

Zehr, J., and Voytek, M.A., 1999, Molecular ecology of aquatic communities--Reflections and future directions: Hydrobiologia, v. 401, p. 1-8, doi:10.1023/A:1003763117784.

Zogorski, J.S., Delzer, G.C., Bender, D.A., Squillace, P.J., Lopes, T.J., Baehr, A.L., Stackelberg, P.E., Landmeyer, J.E., Boughton, C.J., Lico, M.S., Pankow, J.F., Johnson, R.L., and Thomson, N.R., 1998, MTBE--Summary of findings and research by the U.S. Geological Survey, in Annual Conference on Water Quality, American Water Works Association Meeting, Dallas, Texas, June 21-25, 1998: Denver, Colo., American Water Works Association, v. D, p. 287-309.

Zogorski, J.S., Morduchowitz, A., Baehr, A.L., Bauman, B.J., Conrad, D.L., Drew, R.T., Korte, N.E., Lapham, W.W., Pankow, J.F., and Washington, E.R., 1996, Fuel oxygenates and water quality--A summary of current understanding of sources, occurrence in natural waters, environmental behavior, fate, and significanceNational Science and Technology Council-Committe on Environment and Natural Resources, 37 p.


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There are 369 publications in this section of the bibliography. The above list is sorted by author. The Toxics Bibliographic Data Base was last updated on 9/13/18.

 

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