USGS - science for a changing world

Environmental Health - Toxic Substances

Bibliography

Surface-Water Contaminant Transport

Research on the transport and fate of contaminants in surface water

Sorted by Author Sort by Year Sort by Title Sort by Publication Type Only On-Line Reports Search the Toxics Program Bibliography Go to Contents of the Toxics Program Bibliography

A | B | C | D | E | F | G | H | J | K
L | M | N | O | P | R | S | T | V | W | Z

A

Aga, D.S., 1995,
Analytical applications of immunoassays in environmental and agricultural chemistry--study of the fate and transport of herbicides: Lawrence, University of Kansas, Department of Chemistry, Ph.D. thesis, 220 p.
Alpers, C.N., Antweiler, R.C., Taylor, H.E., Dileanis, P.D., and Domagalski, J.J., 2000,
Metals transport in the Sacramento River, California, 1996-97--Volume 2. Interpretation of metal loads: U.S. Geological Survey Water-Resources Investigations Report 00-4002, 106 p.
Alpers, C.N., Stewart, A.R., Saiki, M.K., Marvin-DiPasquale, M., Topping, B.R., Rider, K.M., Gallanthine, S.K., Kester, C.A., Rye, R.O., Antweiler, R.C., and DeWild, J.F., 2008,
Environmental factors affecting mercury in Camp Far West Reservoir, 2001-03: U.S. Geological Survey Scientific Investigations Report 2006-5008, 358 p.
Alpers, C.N., Taylor, H.E., and Domagalski, J.J., 2000,
Metals transport in the Sacramento River, California, 1996-97--Volume 1. Methods and data: U.S. Geological Survey Water-Resources Investigations Report 99-4286, 428 p.
Alpers, C.N., Taylor, H.E., and Domagalski, J.J., 2000,
Summary and conclusions, in Alpers, C.N., Taylor, H.E., and Domagalski, J.J., eds., Metals transport in the Sacramento River, California, 1996-97--Volume 1. Methods and data: U.S. Geological Survey Water-Resources Investigations Report 99-4286, p. 98-99.
Alpers, C.N., Taylor, H.E., Roth, D.A., Cain, D.J., Ball, J.W., Unruh, D.M., and Deleanis, P.D., 2000,
Study design--Field and laboratory methods, in Alpers, C.N., Taylor, H.E., and Domagalski, J.J., eds., Metals transport in the Sacramento River, California, 1996-97--Volume 1. Methods and data: U.S. Geological Survey Water-Resources Investigations Report 99-4286, p. 19-37.
Antweiler, R.C., Dileanis, P.D., Alpers, C.N., and Taylor, H.E., 2000,
Results, in Alpers, C.N., Taylor, H.E., and Domagalski, J.J., eds., Metals transport in the Sacramento River, California, 1996-97--Volume 1. Methods and data: U.S. Geological Survey Water-Resources Investigations Report 99-4286, p. 62-97.
Antweiler, R.C., Smith, R.L., Voytek, M.A., Böhlke, J.-K., and Dupre, D.H., 2005,
Water-quality data from two agricultural drainage basins in northwestern Indiana and northeastern Illinois--III. Biweekly data, 2000-2002: U.S. Geological Survey Open-File Report 2005-1197, 66 p.
Antweiler, R.C., Smith, R.L., Voytek, M.A., and Böhlke, J.K., 2005,
Water-quality data from two agricultural drainage basins in northwestern Indiana and northeastern Illinois--II. Diel data, 1999-2001: U.S. Geological Survey Open-File Report 2005-1053, 114 p.
Antweiler, R.C., Smith, R.L., Voytek, M.A., Böhlke, J.K., and Richards, K.D., 2005,
Water-quality data from two agricultural drainage basins in northwestern Indiana and northeastern Illinois--I. Lagrangian and synoptic data, 1999-2002: U.S. Geological Survey Open-File Report 2004-1317, 206 p.
Antweiler, R.C., Taylor, H.E., and Alpers, C.N., 2012,
Distribution and geochemistry of selected trace elements in the Sacramento River near Keswick Reservoir: Chemical Geology, v. 298-299, p. 70-78, doi:10.1016/j.chemgeo.2011.12.025.
Antweiler, R.C., Writer, J.H., and Murphy, S.F., 2014,
Evaluation of wastewater contaminant transport in surface waters using verified lagrangian sampling: Science of the Total Environment, v. 470-471, p. 551-558, doi:10.1016/j.scitotenv.2013.09.079.
Aulenbach, B.T., Buxton, H.T., Battaglin, W.A., and Coupe, R.H., 2007,
Streamflow and nutrient fluxes of the Mississippi-Atchafalaya River Basin and subbasins for the period of record through 2005: U.S. Geological Survey Open-File Report 2007-1080 (On-line only).
Avanzino, R.J., and Kennedy, V.C., 1993,
Long-term frozen storage of streamwater samples for dissolved orthophosphate, nitrate plus nitrate, and ammonia analysis: Water Resources Research, v. 29, no. 10, p. 3,357-3,362, 93WR01684, doi:10.1029/93WR01684.

B

Baeseman, J., Smith, R., and Silverstein, J., 2006,
Denitrification potential in stream sediments impacted by acid mine drainage--Effects of pH, various electron donors, and iron: Microbial Ecology, v. 51, no. 2, p. 232-241, doi:10.1007/s00248-005-5155-z.
Baker, N.T., Stone, W.W., Wilson, J.T., and Meyer, M.T., 2006,
Occurrence and transport of agricultural chemicals in Leary Weber Ditch Basin, Hancock County, Indiana, 2003-04: U.S. Geological Survey Scientific Investigations Report 2006-5251, 44 p.
Ball, J.W., Nordstrom, D.K., and Runkel, R.L., 2000,
Reactive and non-reactive transport modeling for Wightman Fork, Summitville Mine, Colorado--Application of the OTIS/OTEQ model to a low-flow synoptic study, in Proceedings from the Fifth International Conference on Acid Rock Drainage, Denver, Colorado, May 21-24, 2000: Littleton, Colo., Society for Mining, Metallurgy, and Exploration, v. 1 of 2, p. 125-134.
Ball, J.W., Runkel, R.L., and Nordstrom, D.K., 2005,
Questa baseline and pre-mining ground-water quality investigation. 12. Geochemical and reactive-transport modeling based on tracer injection-synoptic sampling studies for the Red river, New Mexico, 2001-2002: U.S. Geological Survey Scientific Investigations Report 2005-5149, 78 p.
Ball, J.W., Runkel, R.L., and Nordstrom, D.K., 2004,
Evaluating remedial alternatives for the Alamosa River and Wightman Fork, near Summitville Mine, Colorado--Application of a reactive transport model to low- and high-flow simulations, in Zannetti, P., ed., Environmental Sciences and Environmental Computing: The EnviroComp Institute, v. II, p. 1-54.
Ball, J.W., Runkel, R.L., and Nordstrom, D.K., 2001,
Reactive transport modeling at high-flow - Wightman Fork/Alamosa River, USA, in Cidu, R., ed., Proceedings of the Tenth International Symposium on Water - Rock Interaction, Villasimius, Italy, July 10-15, 2001: A.A. Balkema Publishers, v. 2, p. 1181-1184.
Ball, J.W., Runkel, R.L., and Nordstrom, D.K., 1999,
Transport modeling of reactive and non-reactive constituents from Summitville, Colorado--Preliminary results from the application of the OTIS/OTEQ model to the Wightman Fork/Alamosa River System, in Morganwalp, D.W., and Buxton, H.T., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the Technical Meeting, Charleston, South Carolina, March 8-12, 1999--Volume 1 of 3--Contamination from Hardrock Mining: U.S. Geological Survey Water-Resources Investigations Report 99-4018A, p. 305-311.
Barber, L.B., Antweiler, R.C., Flynn, J.L., Keefe, S.H., Kolpin, D.W., Roth, D.A., Schnoebelen, D.J., Taylor, H.E., and Verplanck, P.L., 2011,
Lagrangian mass-flow investigations of inorganic contaminants in wastewater-impacted streams: Environmental Science and Technology, v. 45, no. 7, p. 2575-2583, doi:10.1021/es104138y.
Barber, L.B., II, Leenheer, J.A., Pereira, W.E., Noyes, T.I., Brown, G.K., Tabor, C.F., and Writer, J.H., 1995,
Organic contamination of the Mississippi River from municipal and industrial wastewater, in Meade, R.H., ed., Contaminants in the Mississippi River, 1987-1992: U.S. Geological Survey Circular 1133, p. 115-135.
Barber, L.B., II, Leenheer, J.A., Tabor, C.F., Brown, G.K., Noyes, T.I., and Noriega, M.C., 1995,
Organic compounds and sewage-derived compounds, in Moody, J.A., ed., Chemical data for water samples collected during four upriver cruises on the Mississippi River between New Orleans, Louisiana, and Minneapolis, Minnesota, May 1990-April 1992: U.S. Geological Survey Open-File Report 94-523, p. 211-297.
Barber, L.B., Keefe, S.H., Antweiler, R.C., Taylor, H.E., and Wass, R.D., 2006,
Accumulation of contaminants in fish from wastewater treatment wetlands: Environmental Science and Technology, v. 40, no. 2, p. 603-611, doi:10.1021/es0514287.
Barber, L.B., Keefe, S.H., Brown, G.K., Furlong, E.T., Gray, J.L., Kolpin, D.W., Meyer, M.T., Sandstrom, M.W., and Zaugg, S.D., 2013,
Persistence and potential effects of complex organic contaminant mixtures in wastewater-impacted streams: Environmental Science and Technology, v. 47, no. 5, p. 2177-2188, doi:10.1021/es303720g.
Barber, L.B., Murphy, S.F., Verplanck, P.L., Sandstrom, M.W., Taylor, H.E., and Furlong, E.T., 2006,
Chemical loading into surface water along a hydrological, biogeochemical, and land use gradient--A holistic watershed approach: Environmental Science and Technology, v. 40, no. 2, p. 475-486, doi:10.1021/es051270q.
Barber, L.B., and Writer, J.H., 1998,
Impact of the 1993 flood on the distribution of organic contaminants in bed sediments of the Upper Mississippi River: Environmental Science and Technology, v. 32, no. 14, p. 2077-2083, doi:10.1021/es970795i.
Bargar, J.R., Fuller, C.C., Marcus, M.A., Brearley, A.J., Perez De la Rosa, M., Webb, S.M., and Caldwell, W.A., 2009,
Structural characterization of terrestrial bacteriogenic Mn oxides from Pinal Creek, AZ: Geochimica et Cosmochimica Acta, v. 73, no. 4, p. 889-910, doi:10.1016/j.gca.2008.10.036.
Battaglin, W.A., 2009,
Glypohosate and other pesticides in vernal pools and streams in parks: Park Science, v. 26, no. 2.
Battaglin, W.A., and Goolsby, D.A., 1994,
Relations between herbicide use and annual transport of herbicides in midwestern rivers, 1991-92, in Weigmann, D.L., ed., New Directions in Pesticide Research Development, Management, and Policy--Proceedings of the Fourth National Conference, on Pesticides, Richmond, Va., November 1-3, 1993: p. 711-723.
Battaglin, W.A., Goolsby, D.A., and Coupe, R., 1993,
Annual use and transport of agricultural chemicals in the Mississippi River, 1991-92, in Goolsby, D.A., Boyer, L.L., and Mallard, G.E., eds., Selected papers on agricultural chemicals in water resources of the Midcontinental United States: U.S. Geological Survey Open-File Report 93-418, p. 26-40.
Battaglin, W.A., Goolsby, D.A., and Coupe, R.H., 1996,
Annual use and transport of agricultural chemicals in the Mississippi River, 1991-92, in Morganwalp, D.W., and Aronson, D.A., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the technical meeting, Colorado Springs, Colorado, September 20-24, 1993: U.S. Geological Survey Water-Resources Investigations Report 94-4015, v. 1, p. 429-440.
Battaglin, W.A., Goolsby, D.A., and Mueller, D.K., 1994,
Relations between use, concentration, and transport of agricultural chemicals in the Mississippi River basin, in Marston, R.A., and Hasfurther, V.R., eds., Effects of Human-induced Changes on Hydrologic System--Proceedings of the American Water Resources Association summer symposium, Jackson Hole, Wyoming, June 26-29, 1994: p. 1073-1086.
Battaglin, W.A., Kuivila, K., Winton, K., and Meyer, M., 2008,
Occurrence of chlorothalonil, its transformation products, and selected other pesticides in Texas and Oklahoma streams, 2003-2004: U.S. Geological Survey Scientific Investigations Report 2008-5016, 9 p.
Bencala, K.E., 2010,
Stream-groundwater interactions, in Wilderer, P.A., ed., Treatise on Water Science: Elsevier, v. 2 - Hydrology, Uhlenbrook, S., Ed., ISBN:978-0-444-53193-3.
Bencala, K.E., 2005,
Hyporheic exchange flows, in Anderson, M.G., and McDonnell, J.J., eds., Encyclopedia of Hydrological Sciences: New Jersey, John Wiley and Sons, v. 3, Chapter 113, p. 1,733-1,740.
Bencala, K.E., 2000,
Invited Commentary--Hyporheic zone hydrological processes: Hydrological Processes, v. 14, no. 15, p. 2797-2798, doi:10.1002/1099-1085(20001030)14:15<2797::AID-HYP402>3.0.CO;2-6.
Bencala, K.E., 1985,
Performance of sodium as a transport tracer experimental and simulation analysis, in Subitzky, S., ed., Selected Papers in the Hydrologic Sciences, 1985: U.S. Geological Survey Water-Supply Paper 2270, p. 83-89.
Bencala, K.E., 1984,
Interactions of solutes and streambed sediment--2. A dynamic analysis of coupled hydrologic and chemical processes that determine solute transport: Water Resources Research, v. 20, no. 12, p. 1804-1814, 4W1201, doi:10.1029/WR020i012p01804.
Bencala, K.E., 1983,
Simulation of solute transport in a mountain pool and-riffle stream with a kinetic mass transfer model for sorption: Water Resources Research, v. 19, no. 3, p. 732-738, doi:10.1029/WR019i003p00732.
Bencala, K.E., Duff, J.H., Harvey, J.W., Jackman, A.P., and Triska, F.J., 1993,
Modelling within the stream-catchment continuum, in Jakeman, A.J., Beck, M.B., and McAleer, J.J., eds., Modelling Change in Environmental Systems: Wiley, p. 163-187.
Bencala, K.E., Duff, J.H., Harvey, J.W., Jackman, J.P., and Triska, F.J., 1993,
Physical transport influencing biogeochemistry within the stream catchment continuum, in Jakeman, A.J., Beck, M.B., and McAleer, M.J., eds., Modelling change in environmental systems: New York, J. Wiley and Sons.
Bencala, K.E., Gooseff, M.N., and Kimball, B.A., 2011,
Rethinking hyporheic flow and transient storage to advance understanding of stream-catchment connections: Water Resources Research, v. 47, no. 3, W00H03, doi:10.1029/2010wr010066.
Bencala, K.E., Jackman, A.P., Kennedy, V.C., Avanzino, R.J., and Zellweger, G.W., 1983,
Kinetic analysis of strontium and potassium sorption onto sands and gravels in a natural channel: Water Resources Research, v. 19, no. 3, p. 725-731, doi:10.1029/WR019i003p00725.
Bencala, K.E., Kennedy, V.C., Zellweger, G.W., Jackman, A.P., and Avanzino, R.J., 1984,
Interactions of solutes and streambed sediments--1. An experimental analysis of cation and anion transport in a mountain stream: Water Resources Research, v. 20, no. 12, p. 1797-1803, 4W1200, doi:10.1029/WR020i012p01797.
Bencala, K.E., Kimball, B.A., and McKnight, D.M., 1991,
Use of variation in solute concentration to identify interactions of the substream zone with instream transport, in Mallard, G.E., and Aronson, D.A., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the technical meeting, Monterey, California, March 11-15, 1991: U.S. Geological Survey Water-Resources Investigations Report 91-4034, p. 377-379.
Bencala, K.E., McKnight, D.M., Zellweger, G.W., and Goad, J., 1986,
The stability of Rhodamine WT dye in trial studies of solute transport in an acidic and metal-rich stream, in Subitzky, S., ed., Selected papers in the hydrologic sciences, 1986: U.S. Geological Survey Water-Supply Paper 2310, p. 87-95.
Bencala, K.E., McKnight, D.M., Zellweger, G.W., and Kimball, B.A., 1988,
Monitoring acidic streams for transport studies, in Mallard, G.E., ed., U.S. Geological Survey Toxic Substances Hydrology Program--Surface-Water Contamination--Proceedings of the technical meeting, Denver, Colorado, February 2-4, 1987: U.S. Geological Survey Open-File Report 87-764, p. 119-124.
Bencala, K.E., and Ortiz, R.F., 1999,
Theory and(or) reality--Analysis of sulfate mass-balance at Summitville, Colorado, poses process questions about the estimation of metal loadings, in Morganwalp, D.W., and Buxton, H.T., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the Technical Meeting, Charleston, South Carolina, March 8-12, 1999--Volume 1 of 3--Contamination from Hardrock Mining: U.S. Geological Survey Water-Resources Investigations Report 99-4018A, p. 119-122.
Bencala, K.E., Rathbun, R.E., Jackman, A.P., Kennedy, V.C., Zellweger, G.W., and Avanzino, R.J., 1983,
Rhodamine-WT dye losses in a mountain stream environment: Water Resources Bulletin, v. 19, p. 943-950.
Bencala, K.E., Triska, F.J., Kennedy, V.C., Zellweger, G.W., Duff, J.H., and Avanzino, R.J., 1989,
Exchange between stream and substream flows--Implications for pollutant transport and nutrient cycling through a forested watershed, in Mallard, G.E., and Ragone, S.E., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the technical meeting, Phoenix, Arizona, September 26-30, 1988: U.S. Geological Survey Water-Resources Investigations Report 88-4220, p. 610.
Bencala, K.E., and Walters, R.A., 2010,
Simulation of solute transport in a mountain pool-and-riffle stream--A transient storage model (Chap. F2), in Burt, T.P., Pinay, G., and Sabater, S., eds., Riparian Zone Hydrology and Biogeochemisty--IAHS Benchmark Papers in Hydrology Series no. 5: Wallingford, U.K., IAHS Press, ISBN:978-907161-09-4 (Reprinting of Bencala and Walters, 1983: Water Resources Research, v.19, p.718-724.).
Bencala, K.E., and Walters, R.A., 1983,
Simulation of solute transport in a mountain pool-and-riffle stream--A transient storage model: Water Resources Research, v. 19, no. 3, p. 718-724, doi:10.1029/WR019i003p00718.
Bergamaschi, B.A., Kuivila, K.M., and Fram, M.S., 2001,
Pesticides associated with suspended sediments entering San Francisco Bay following the first major storm of water year 1996: Estuaries, v. 24, no. 3, p. 368-380.
Böhlke, J.K., Antweiler, R.C., Harvey, J.W., Laursen, A.E., Smith, L.K., Smith, R.L., and Voytek, M.A., 2009,
Multi-scale measurements and modeling of denitrification in streams with varying flow and nitrate concentration in the upper Mississippi River Basin, USA: Biogeochemistry, v. 93, no. 1-2, p. 117-141, doi:10.1007/s10533-008-9282-8.
Böhlke, J.K., O'Connell, M.E., and Prestegaard, K.L., 2007,
Ground water stratification and delivery of nitrate to an incised stream under varying flow conditions: Journal of Environmental Quality, v. 36, no. 3, p. 664-680, doi:10.2134/jeq2006.0084.
Borch, T., Campbell, K., and Kretzschmar, R., 2009,
How electron flow controls contaminant dynamics: Environmental Science and Technology, v. 44, no. 1, p. 3-6, doi:10.1021/es903264z.
Borch, T., Kretzschmar, R., Kappler, A., Cappellen, P.V., Ginder-Vogel, M., Voegelin, A., and Campbell, K., 2009,
Biogeochemical redox processes and their Impact on contaminant dynamics: Environmental Science and Technology, v. 44, no. 1, p. 15-23, doi:10.1021/es9026248.
Borrok, D.M., Nimick, D.A., Wanty, R.B., and Ridley, W.I., 2008,
Isotopic variation of dissolved copper and zinc in stream waters affected by historical mining: Geochimica et Cosmochimica Acta, v. 72, no. 2, p. 329-344, doi:10.1016/j.gca.2007.11.014.
Boyer, E.W., 1994,
Hydrology and the variation of dissolved organic carbon in soil and stream waters of two headwater catchments--Summit County, Colorado: Charlottesville, University of Virginia, Master of Science Thesis, Environmental Science, 102 p.
Boyer, E.W., Hornberger, G.M., Bencala, K.E., and McKnight, D.M., 2000,
Effects of asynchronous snowmelt on flushing of dissolved organic carbon--A mixing model approach: Hydrological Processes, v. 14, no. 18, p. 3291-3308, doi:10.1002/1099-1085(20001230)14:18<3291::AID-HYP202>3.0.CO;2-2.
Boyer, E.W., Hornberger, G.M., Bencala, K.E., and McKnight, D.M., 1997,
Response characteristics of DOC flushing in an alpine catchment: Hydrological Processes, v. 11, no. 12, p. 1635-1647, doi:10.1002/(SICI)1099-1085(19971015)11:12<1635::AID-HYP494>3.0.CO;2-H.
Boyer, E.W., Hornberger, G.M., Bencala, K.E., and McKnight, D.M., 1996,
Overview of a simple model describing variation of dissolved organic carbon in an upland catchment: Ecological Modeling, v. 86, p. 183-188, doi:10.1016/0304-3800(95)00049-6.
Boyer, E.W., Hornberger, G.W., and Bencala, K.E., 1993,
Hydrological controls on the temporal variation of dissolved organic carbon in Deer Creek near Montezuma, Colorado, in McAleer, M., and Jakeman, A., eds., Proceedings of the 10th Biennial Conference of the Modeling and Simulation Society of Australia, December 6-10, 1993: The University of Western Australia, p. 501-506.
Boyer, E.W., McKnight, D.M., Bencala, K.E., Brooks, P.D., Anthony, M.W., Zellweger, G.W., and Harnish, R.E., 1999,
Streamflow and water quality characteristics for the Upper Snake River and Deer Creek Catchments in Summit County, Colorado--Water years 1980 to 1990: Institute of Arctic and Alpine Research, University of Colorado Occasional Paper 53, 81 p (+ diskett).
Bradford, S.A., Morales, V.L., Zhang, W., Harvey, R.W., Packman, A.I., Mohanram, A., and Welty, C., 2013,
Transport and fate of microbial pathogens in agricultural settings: Critical Reviews in Environmental Science and Technology, v. 43, no. 8, p. 775-893, doi:10.1080/10643389.2012.710449.
Bradley, P.M., Barber, L.B., Chapelle, F.H., Gray, J.L., Kolpin, D.W., and McMahon, P.B., 2009,
Biodegradation of 17β-estradiol, estrone and testosterone in stream sediments: Environmental Science and Technology, v. 43, no. 6, p. 1902-1910, doi:10.1021/es802797j.
Bradley, P.M., Barber, L.B., Kolpin, D.W., McMahon, P.B., and Chapelle, F.H., 2008,
Potential for 4-n-nonylphenol biodegradation in stream sediments: Environmental Toxicology and Chemistry, v. 27, no. 2, p. 260-265, doi:10.1897/07-333R.1.
Bradley, P.M., Barber, L.B., Kolpin, D.W., McMahon, P.B., and Chapelle, F.H., 2007,
Biotransformation of caffeine, cotinine, and nicotine in stream sediments--Implications for use as wastewater indicators: Environmental Toxicology and Chemistry, v. 26, no. 6, p. 1116-1121, doi:10.1897/06-483R.1.
Bradley, P.M., Burns, D.A., Murray, K.R., Brigham, M.E., Button, D.T., Chasar, L.C., Marvin-DiPasquale, M., Lowery, M.A., and Journey, C.A., 2011,
Spatial and seasonal variability of dissolved methylmercury in two stream basins in the eastern United States: Environmental Science and Technology, v. 45, no. 6, p. 2048-2055, doi:10.1021/es103923j.
Bradley, P.M., Chapelle, F.H., Barber, L.B., McMahon, P.B., Gray, J.L., and Kolpin, D.W., 2009,
Biodegradation of 17β-estradiol, estrone, and testosterone in stream sediments, in Wickramanayake, G.B., and Rectanus, H.V., eds., In Situ and On-Site Bioremediation-2009--Proceedings of the 10th International In Situ and On-Site Bioremediation Symposium, Baltimore, MD, May 5-8, 2009: Columbus, Ohio, Battelle Memorial Institute, ISBN:9780981973012.
Bradley, P.M., Journey, C.A., Lowery, M.A., Brigham, M.E., Burns, D.A., Button, D.T., Chapelle, F.H., Lutz, M.A., Marvin-Dipasquale, M.C., and Riva-Murray, K., 2012,
Shallow groundwater mercury supply in a coastal plain stream: Environmental Science and Technology, v. 46, no. 14, p. 7503-7511, doi:10.1021/es301540g.
Breault, R.F., Colman, J.A., Aiken, G.R., and McKnight, D.M., 1996,
Copper speciation and binding by organic matter in copper-contaminated streamwater: Environmental Science and Technology, v. 30, no. 12, p. 3477-3486, doi:10.1021/es9601301.
Briggs, M.A., Lautz, L.K., and Hare, D.K., 2013,
Residence Time control on hot moments of net nitrate production and uptake in the hyporheic zone: Hydrological Processes, doi:10.1002/hyp.9921.
Briggs, M.A., Lautz, L.K., Hare, D.K., and González-Pinzón, R., 2013,
Relating hyporheic fluxes, residence times, and redox-sensitive biogeochemical processes upstream of beaver dams: Freshwater Science, v. 32, no. 2, p. 622-641, doi:10.1899/12-110.1.
Brigham, M.E., Wentz, D.A., Aiken, G.R., and Krabbenhoft, D.P., 2009,
Mercury cycling in stream ecosystems--1. Water column chemistry and transport: Environmental Science and Technology, v. 43, no. 8, p. 2720-2725, doi:10.1021/es802694n.
Brinton, T.I., Garbarino, J.R., Peart, D.B., Taylor, H.E., and Antweiler, R.C., 1995,
Concentration and transport data for dissolved inorganic constituents in water collected during seven cruises on the Mississippi River and some of its tributaries, July 1987 - June 1990: U.S. Geological Survey Open-File Report 94-524, 102 p.
Brooks, P.D., McKnight, D.M., and Bencala, K.E., 2001,
Annual maxima in zinc concentrations during spring snowmelt in streams impacted by mine drainage: Environmental Geology, v. 40, no. 11-12, p. 1447-1454, doi:10.1007/s002540100338.
Brooks, P.D., McKnight, D.M., and Bencala, K.E., 1999,
The relationship between soil heterotrophic activity, soil dissolved organic carbon (DOC) leachate, and catchment-scale DOC export in headwater catchments: Water Resources Research, v. 35, no. 6, p. 1895-1902, 1998WR900125, doi:10.1029/1998WR900125.
Broshears, R.E., 1996,
Reactive solute transport in acidic streams: Water, Air, and Soil Pollution, v. 90, no. 1-2, p. 195-204.
Broshears, R.E., Bencala, K.E., Kimball, B.A., and McKnight, D.M., 1992,
Tracer-dilution experiments and solute-transport simulations for a mountain streams, Saint Kevin Gulch, Colorado: U.S. Geological Survey Water-Resources Investigations Report 92-4081, 18 p.
Broshears, R.E., Kimball, B.A., and Runkel, R.L., 1996,
Simulation of reactive transport during a pH modification experiment in a mountain stream affected by acid mine drainage, in Morganwalp, D.W., and Aronson, D.A., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the technical meeting, Colorado Springs, Colorado, September 20-24, 1993: U.S. Geological Survey Water-Resources Investigations Report 94-4015, v. 2, p. 781-788.
Broshears, R.E., Kimball, B.A., and Runkel, R.L., 1995,
Interpreting spatial profiles of concentration in acid mine drainage streams, in Hotchkiss, W.R., Downey, J.S., Gutentag, E.D., and Moore, J.E., eds., Water resources at risk, Denver, Colo.: Minneapolis, Minnesota, American Institute of Hydrology, p. LL-10-21.
Broshears, R.E., Runkel, R.L., and Kimball, B.A., 1994,
Development and application of a reactive solute transport model for trace metals in mountain streams, in Dutton, A.R., ed., Toxic Substances and the Hydrologic Sciences--Proceedings of the conference, Austin, Texas, April 10-13, 1994: Minneapolis, Minn., American Institute of Hydrology, p. 19-34.
Broshears, R.E., Runkel, R.L., Kimball, B.A., Bencala, K.E., and McKnight, D.M., 1996,
Reactive solute transport in an acidic stream--Experimental pH increase and simulation of controls on pH, aluminum, and iron: Environmental Science and Technology, v. 30, no. 10, p. 3016-24, doi:10.1021/es960055u.
Brown, D.W., and Hem, J.D., 1984,
Development of a model to predict the adsorption of lead from solution on a natural streambed sediment: U.S. Geological Survey Water-Supply Paper 2187, 35 p.
Buszka, P.M., Barber, L.B., II, Schroeder, M.P., and Becker, L.D., 1994,
Determination of organic compounds downstream from a treated-wastewater discharge near Dallas, Texas, March 1987: U.S. Geological Survey Water-Resources Investigations Report 93-4194, 19 p.

C

Cain, D.J., Buchwalter, D.B., and Luoma, S.N., 2006,
Influence of metal exposure history on the bioaccumulation and subcellular distribution of aqueous cadmium in the insect Hydropsyche californica: Environmental Toxicology and Chemistry, v. 25, no. 4, p. 1042-1049, doi:10.1897/05-255R.1.
Cain, D.J., Carter, J.L., Fend, S.V., Luoma, S.N., Alpers, C.N., and Taylor, H.E., 2000,
Metal exposure to a benthic invertebrate, Hydropsyche californica, in the Sacramento River downstream of Keswick Reservoir, California: Canadian Journal of Fisheries, v. 57, p. 380-390.
Callender, E., and Robbins, J.A., 1993,
Transport and accumulation of radionuclides and stable elements in a Missouri River reservoir: Water Resources Research, v. 29, no. 6, p. 1787-1804, 93WR00387, doi:10.1029/93WR00387.
Cardenas, M.B., Harvey, J.W., Packman, A.I., and Scott, D.T., 2008,
Ground-based thermography of fluvial systems at low and high discharge reveals potential complex thermal heterogeneity driven by flow variation and bioroughness: Hydrologic Processes, v. 22, no. 7, p. 980-986, doi:10.1002/hyp.6932.
Caruso, B.S., Cox, T.J., Runkel, R.L., Velleux, M.L., Bencala, K.E., Nordstrom, D.K., Julien, P.Y., Butler, B.A., Alpers, C.N., Marion, A., and Smith, K.S., 2008,
Metals fate and transport modelling in streams and watersheds--State of the science and USEPA workshop review: Hydrologic Processes, v. 22, no. 19, p. 4011-4021, doi:10.1002/hyp.7114.
Chapin, T.P., Nimick, D.A., Gammons, C.H., and Wanty, R.B., 2007,
Diel cycling of zinc in a stream impacted by acid rock drainage--Initial results from a new in situ Zn analyzer: Environmental Monitoring and Assessment, v. 133, no. 1-3, p. 161-167, doi:10.1007/s10661-006-9569-y.
Chapra, S.C., and Runkel, R.L., 1999,
Modeling impact of storage zones on stream dissolved oxygen: Journal of Environmental Engineering, v. 125, no. 5, p. 415-419.
Chasar, L.C., Scudder, B.C., Stewart, A.R., Bell, A.H., and Aiken, G.R., 2009,
Mercury cycling in stream ecosystems--3. Trophic dynamics and methylmercury bioaccumulation: Environmental Science and Technology, v. 43, no. 8, p. 2,733-2,739, doi:10.1021/es8027567.
Cheng, R.T., Gartner, J.W., Cacchione, D.A., and Tate, G.B., 1998,
Flow and suspended particulate transport in a tidal boundary layer, South San Francisco Bay, California, in Dronkers, J., and Scheffers, M., eds., Physics of Estuaries and Coastal Seas: Rotterdam, Balkema, p. 3-12.
Choi, J., Harvey, J.W., and Conklin, M.H., 2000,
Characterizing multiple timescales of stream and storage zone interaction that affect solute fate and transport in streams: Water Resources Research, v. 36, no. 6, p. 1511-1518, 2000WR900051, doi:10.1029/2000WR900051.
Church, S.E., Kimball, B.A., Fey, D.L., Ferderer, D.A., Yager, T.J., and Vaughn, R.B., 1997,
Source, transport, and partitioning of metals between water, colloids, and bed sediments of the Animas River, Colorado: U.S. Geological Survey Open-File Report 97-151, 1-135 p.
Church, S.E., Owen, J.R., von Guerard, P., Verplanck, P.L., Kimball, B.A., and Yager, D.B., 2007,
The effects of acidic mine drainage from historical mines in the Animas River watershed, San Juan County, Colorado--What is being done and what can be done to improve water quality?, in DeGraff, J.V., ed., Understanding and responding to hazardous substances at mine sites in the western United States: Boulder, Colo., Geological Society of America, p. 47-83, ISBN:9780813741178.
Clark, G.M., and Goolsby, D.A., 1999,
Occurrence and transport of acetochlor in streams of the Mississippi River Basin: Journal of Environmental Quality, v. 28, no. 6, p. 1787-1795, doi:10.2134/jeq1999.00472425002800060014x.
Constantz, J., Cox, M.H., Sarma, L., and Mendez, G., 2003,
The Santa Clara River--The last natural river of Los Angeles, in Stonestrom, D.A., and Constantz, J., eds., Heat as a tool for studying the movement of ground water near streams: U.S. Geological Survey Circular 1260, p. 21-27.
Constantz, J., Cox, M.H., and Su, G.W., 2003,
Comparison of heat and bromide as ground-water tracers near streams: Ground Water, v. 41, no. 5, p. 647-656, doi:10.1111/j.1745-6584.2003.tb02403.x.
Constantz, J., Jasperse, J., Seymour, D., and Su, G.W., 2003,
Heat tracing in the streambed along the Russian River of northern California, in Stonestrom, D.A., and Constantz, J., eds., Heat as a tool for studying the movement of ground water near streams: U.S. Geological Survey Circular 1260, p. 17-20.
Constantz, J., and Stonestrom, D.A., 2003,
Heat as a tracer of water movement near streams, in Stonestrom, D.A., and Constantz, J., eds., Heat as a tool for studying the movement of ground water near streams: U.S. Geological Survey Circular 1260, p. 1-6.
Cox, M.H., and Hatch, C., 2003,
Water temperature, streamflow, and ground-water elevation in and adjacent to the Russian River between Hopland and Guerneville, CA from 1998-2002: U.S. Geological Survey Open-File Report 2003-454, 39 p.
Cox, M.H., Mendez, G.O., Kratzer, C.R., and Reichard, E.G., 2003,
Evaluation of tracer tests completed in 1999 and 2000 on the upper Santa Clara River, Los Angeles and Ventura Counties, California: U.S. Geological Survey Water-Resources Investigations Report 2003-4277, 99 p.
Cox, T.J., and Runkel, R.L., 2008,
Eulerian-Lagrangian numerical scheme for simulating advection, dispersion, and transient storage in streams and a comparison of numerical methods: Journal of Environmental Engineering, v. 134, no. 12, p. 996-1005, doi:10.1061/(ASCE)0733-9372(2008)134:12(996).
Cozzetto, K.D., Bencala, K.E., Gooseff, M.N., and McKnight, D.M., 2013,
The influence of stream thermal regimes and preferential flow paths on hyporheic exchange in a glacial meltwater stream: Water Resources Research, v. 49, doi:10.1002/wrcr.20410.
Cromwell, A.E., and Thurman, E.M., 1996,
Atrazine transport and degradation in a pristine watershed--The fate of atrazine deposited by precipitation, in Morganwalp, D.W., and Aronson, D.A., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the technical meeting, Colorado Springs, Colorado, September 20-24, 1993: U.S. Geological Survey Water-Resources Investigations Report 94-4015, v. 1, p. 423-428.
Croué, J.-P., Benedetti, M.F., Violleau, D., and Leenheer, J.A., 2003,
Characterization and copper binding of humic and nonhumic organic matter isolated from the South Platte River--Evidence for the presence of nitrogenous binding site: Environmental Science and Technology, v. 37, no. 2, p. 328-336, doi:10.1021/es020676p.

D

Demas, C.R., 1988,
Fate and transport of organic compounds in the lower Calcasieu River, Louisiana, in U.S. Geological Survey Yearbook, Fiscal Year 1987, p. 83-89.
Demas, C.R., Curwick, P.B., and Demcheck, D.K., 1989,
The use of radon-222 as a tracer of transport across the bed sediment-water interface in Prien Lake, Louisiana, in Mallard, G.E., and Ragone, S.E., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the technical meeting, Phoenix, Arizona, September 26-30, 1988: U.S. Geological Survey Water-Resources Investigations Report 88-4220, p. 291-300.
Demas, C.R., and Demcheck, D.K., 1989,
Fate and transport of organic compounds and trace elements in the lower Calcasieu River, Louisiana, in Mallard, G.E., and Ragone, S.E., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the technical meeting, Phoenix, Ariz., September 26-30, 1988: U.S. Geological Survey Water-Resources Investigations Report 88-4220, p. 271-281.
Deonarine, A., Lau, B.L.T., Aiken, G.R., Ryan, J.N., and Hsu-Kim, H., 2011,
Effects of humic substances on precipitation and aggregation of zinc sulfide nanoparticles: Environmental Science and Technology, v. 45, no. 8, p. 3217-3223, doi:10.1021/es1029798.
Dittman, J.A., Shanley, J.B., Driscoll, C.T., Aiken, G.R., Chalmers, A.T., and Towse, J.E., 2009,
Ultraviolet absorbance as a proxy for total dissolved mercury in streams: Environmental Pollution, v. 157, no. 6, p. 1953-1956, doi:10.1016/j.envpol.2009.01.031.
Dittman, J.A., Shanley, J.B., Driscoll, C.T., Aiken, G.R., Chalmers, A.T., Towse, J.E., and Selvendiran, P., 2010,
Mercury dynamics in relation to dissolved organic carbon concentration and quality during high flow events in three northeastern U.S. streams: Water Resources Research, v. 46, no. 7, p. W07522, doi:10.1029/2009wr008351.
Domagalski, J.L., and Kuivila, K.M., 1991,
Transport and transformation of dissolved rice pesticides in the Sacramento River Delta, Calif., in Mallard, G.E., and Aronson, D.A., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the technical meeting, Monterey, California, March 11-15, 1991: U.S. Geological Survey Water-Resources Investigations Report 91-4034, p. 664-666.
Duff, J.H., Murphy, F., Fuller, C.C., Triska, F.J., Harvey, J.W., and Jackman, A.P., 1998,
A mini drive point sampler for measuring pore water solute concentrations in the hyporheic zone of sand-bottom streams: Limnology and Oceanography, v. 43, no. 6, p. 1378-1383.
Duff, J.H., Pringle, C.M., and Triska, F.J., 1996,
Nitrate reduction in sediments of lowland tropical streams draining swamp forest in Costa Rica--An ecosystem perspective: Biogeochemistry, v. 33, p. 179-196.
Duff, J.H., Toner, B., Jackman, A.P., and Triska, F.J., 2000,
Determination of groundwater discharge into a sand and gravel bottom river--A preliminary comparison of chloride dilution and seepage meter techniques: Internationale Vereinigung fur Theoretische und Angewandte Limnologie, v. 27, p. 1-6.
Duff, J.H., and Triska, F.J., 2000,
Nitrogen biogeochemistry and surface-subsurface exchange in streams, in Jones, J.B., and Mulholland, P.J., eds., Streams and Groundwater: New York, Academic Press, p. 197-220.
Duff, J.H., Triska, F.J., Jackman, A.P., and LaBaugh, J.W., 1997,
The influence of stream bed sediments on the solute chemistry of the upper Shingobee River, in Winter, T.C., ed., Interdisciplinary Research Initiative--Hydrological and biogeochemical research in the Shingobee river headquarters area, north-central Minnesota: U.S. Geological Survey Water-Resources Investigations Report 96-4215, p. 143-148.
Dunlap, C.E., Alpers, C.N., Bouse, R., Taylor, H.E., Unruh, D.M., and Flegal, A.R., 2008,
The persistence of lead from past gasoline emissions and mining drainage in a large riparian system--Evidence from lead isotopes in the Sacramento River, California: Geochimica et Cosmochimica Acta, v. 72, no. 24, p. 5935-5948, doi:10.1016/j.gca.2008.10.006.

E

Elder, J.F., 1988,
Metal biogeochemistry in surface-water systems--A review of principles and concepts: U.S. Geological Survey Circular 1013, 43 p.
Ellis, G.S., Huckins, J.N., Rostad, C.E., Schmitt, C.J., Petty, J.D., and MacCarthy, P., 1995,
Evaluation of lipid-containing semipermeable membrane devices for monitoring organochlorine contaminants in the Upper Mississippi River: Environmental Toxicology and Chemistry, v. 14, no. 11, p. 1875-1884.
Eychaner, J.H., 1991,
Solute transport in perennial streamflow at Pinal Creek, Arizona, in Mallard, G.E., and Aronson, D.A., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the technical meeting, Monterey, California, March 11-15, 1991: U.S. Geological Survey Water-Resources Investigations Report 91-4034, p. 481-485.

F

Fallon, J.D., 1994,
Determining the 3-dimensional distribution, transport, and relative age of atrazine and selected metabolites in Perry Lake, Kansas: Lawrence, University of Kansas, Department of Civil Engineering, M.S. thesis, 176 p.
Fallon, J.D., and Thurman, E.M., 1996,
Determining the relative age, transport, and three-dimensional distribution of atrazine in a reservoir using immunoassay, in Morganwalp, D.W., and Aronson, D.A., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the technical meeting, Colorado Springs, Colorado, September 20-24, 1993: U.S. Geological Survey Water-Resources Investigations Report 94-4015, v. 1, p. 499-504.
Farag, A.M., Nimick, D.A., Kimball, B.A., Church, S.E., Harper, D.D., and Brumbaugh, W.G., 2007,
Concentrations of metals in water, sediment, biofilm, benthic macroinvertebrates, and fish in the Boulder River Watershed, Montana, and the role of colloids in metal uptake: Archives of Environmental Contamination and Toxicology, v. 52, no. 3, p. 397-409, doi:10.1007/s00244-005-0021-z.
Flegal, A.R., Brown, C.L., Squire, S., Ross, J.R.M., Scelfo, G.M., and Hibdon, S., 2007,
Spatial and temporal variations in silver contamination and toxicity in San Francisco Bay: Environmental Research, v. 105, no. 1, p. 34-52, doi:10.1016/j.envres.2007.05.006.
Flint, M.R., Bencala, K.E., Zellweger, G.W., and Hammermeister, D.P., 1985,
Data from a solute transport experiment in the Leviathan Mine drainage, Alpine County, Calif., October 1982: U.S. Geological Survey Open-File Report 85-85, 107 p.
Fuller, C.C., and Bargar, J.R., 2014,
Processes of zinc attenuation by biogenic manganese oxides forming in the hyporheic zone of pinal creek, Arizona: Environmental Science and Technology, v. 48, no. 4, p. 2165-2172, doi:10.1021/es402576f.
Fuller, C.C., Davis, J.A., Cain, D.J., Lamothe, P.J., Fries, T.L., Fernandez, G., Vargas, J.A., and Murillo, M.M., 1990,
Distribution and transport of sediment-bound metal contaminants in the Rio Grande de Tarcoles, Costa Rica (Central America): Water Research, v. 24, p. 805-812.
Fuller, C.C., and Harvey, J.W., 2000,
Reactive uptake of trace metals in the hyporheic zone of a mining-contaminated stream, Pinal Creek, Arizona: Environmental Science and Technology, v. 34, no. 7, p. 1150-1155, doi:10.1021/es990714d.
Fuller, C.C., and Harvey, J.W., 1999,
The effect of trace-metal reactive uptake in the hyporheic zone on reach-scale metal transport in Pinal Creek, Arizona, in Morganwalp, D.W., and Buxton, H.T., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the Technical Meeting, Charleston, South Carolina, March 8-12, 1999--Volume 1 of 3--Contamination from Hardrock Mining: U.S. Geological Survey Water-Resources Investigations Report 99-4018A, p. 163-172.

G

Gammons, C.H., Grant, T.M., Nimick, D.A., Parker, S.R., and DeGrandpre, M.D., 2007,
Diel changes in water chemistry in an arsenic-rich stream and treatment-pond system: Science of the Total Environment, v. 384, no. 1-3, p. 433-451, doi:10.1016/j.scitotenv.2007.06.029.
Gammons, C.H., Milodragovich, L., and Belanger-Woods, J., 2007,
Influence of diurnal cycles on metal concentrations and loads in streams draining abandoned mine lands--An example from High Ore Creek, Montana: Environmental Geology, v. 53, no. 3, p. 611-622, doi:10.1007/s00254-007-0676-z.
Garbarino, J.R., Antweiler, R.C., Brinton, T.I., Roth, D.A., and Taylor, H.E., 1995,
Concentration and transport data for selected dissolved inorganic constituents and dissolved organic carbon in water collected from the Mississippi River and some of its tributaries, July 1991 - May 1992: U.S. Geological Survey Open-File Report 95-149, 149 p.
Garbarino, J.R., Hayes, H.C., Roth, D.A., Antweiler, R.C., Brinton, T.I., and Taylor, H.E., 1995,
Heavy metals in the Mississippi River, in Meade, R.H., ed., Contaminants in the Mississippi River, 1987-92: U.S. Geological Survey Circular 1133, p. 52-71.
Gartner, J.W., and Cheng, R.T., 1996,
Near bottom velocity measurements in San Francisco Bay, California, in Proceedings, Oceans 96 MTS/IEEE Conference, Ft. Lauderdale, Fla., September 23-26, 1996: Marine Technology Society/Institute of Electrical and Electronic Engineers, p. 457-462.
Gartner, J.W., Prych, E.A., Tate, G.B., Cacchione, D.A., Cheng, R.T., Bidlake, W.R., and Ferreira, J.T., 1998,
Water velocity and the potential for the movement of bed sediments in Sinclair Inlet of Puget Sound, Washington: U.S. Geological Survey Open-File Report 98-572, 140 p.
Gibs, J., Heckathorn, H.A., Meyer, M.T., Klapinski, F.R., Alebus, M., and Lippincott, R.L., 2013,
Occurrence and partitioning of antibiotic compounds found in the water column and bottom sediments from a stream receiving two wastewater treatment plant effluents in northern New Jersey, 2008: Science of the Total Environment, v. 458-460, p. 107-16, doi:10.1016/j.scitotenv.2013.03.076.
Glassmeyer, S.T., Ferrer, I., Furlong, E.T., Cahill, J.D., Zaugg, S.D., Kolpin, D.W., and Kryak, D.D., 2003,
Transport of chemical and microbial contaminants from known wastewater discharges, in Proceedings of the 3rd International Conference on Pharmaceuticals and Endocrine Disrupting Chemicals in Water, Minneapolis, Minnesota, March 19-21, 2003: National Ground Water Association, p. 267-269, CD-ROM.
Glassmeyer, S.T., Furlong, E.T., Kolpin, D.W., Cahill, J.D., Zaugg, S.D., Werner, S.L., Meyer, M.T., and Kryak, D.D., 2005,
Transport of chemical and microbial compounds from known wastewater dishcarges--Potential for use as indicators of human fecal contamination: Environmental Science and Technology, v. 39, no. 14, p. 5157-5169, doi:10.1021/es048120k.
Goolsby, D.A., and Battaglin, W.A., 1994,
Occurrence and transport of pesticides in the Mississippi River basin, in Proceedings of WATERSHED93--A National Conference on River Basin Planning, Alexandria, Va., March 24, 1993: p. 827.
Goolsby, D.A., and Battaglin, W.A., 1993,
Occurrence, distribution, and transport of agricultural chemicals in surface waters of the Midwestern United States, in Goolsby, D.A., Boyer, L.L., and Mallard, G.E., eds., Selected papers on agricultural chemicals in water resources of the Midcontinental United States: U.S. Geological Survey Open-File Report 93-418, p. 1-25.
Goolsby, D.A., Battaglin, W.A., and Hooper, R.P., 1997,
Sources and transport of nitrogen in the Mississippi River Basin, in From the Corn Belt to the Gulf--Agriculture and Hypoxia in the Mississippi River Watershed, Proceedings, St. Louis, Mo., July 14-15, 1997: American Farm Bureau Federation, p. 6.
Goolsby, D.A., Battaglin, W.A., and Thurman, E.M., 1994,
Occurrence and transport of herbicides and nitrate in the Mississippi River during the 1993 flood--Proceedings of American Water Resources Association meeting, in, Nashville, Tenn., April 17-20, 1994: p. 473-477.
Goolsby, D.A., Battaglin, W.A., and Thurman, E.M., 1993,
Occurrence and transport of agricultural chemicals in the Mississippi River basin, July through August 1993--Floods in the Upper Mississippi River Basin, 1993: U.S. Geological Survey Circular 1120-C, 22 p.
Goolsby, D.A., Hooper, R.P., and Battaglin, W.A., 1998,
Sources and transport of nitrogen in the Mississippi River Basin, in Proceedings "From the Corn Belt to the Gulf...Agriculture and Hypoxia in the Mississippi River Watershed," American Farm Bureau Federation Workshop, St Louis, Missouri, July 14-15, 1997: St Louis, Missouri, American Farm Bureau Federation, p. 59-64 (document has no page numbers).
Goolsby, D.A., Thurman, E.M., Pomes, M.L., Meyer, M., and Battaglin, W.A., 1996,
Occurrence, deposition, and long range transport of herbicides in precipitation in the Midwestern and Northeastern United States, in Morganwalp, D.W., and Aronson, D.A., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the technical meeting, Colorado Springs, Colorado, September 20-24, 1993: U.S. Geological Survey Water-Resources Investigations Report 94-4015, v. 1, p. 411-421.
Goolsby, D.A., Thurman, E.M., Pomes, M.L., Meyer, M., and Battaglin, W.A., 1993,
Occurrence, deposition, and long range transport of herbicides in precipitation in the Midwestern and Northeastern United States, in Goolsby, D.A., Boyer, L.L., and Mallard, G.E., eds., Selected papers on agricultural chemicals in water resources of the Midcontinental United States: U.S. Geological Survey Open-File Report 93-418, p. 75-89.
Goolsby, D.A., Thurman, E.M., Pomes, M.L., Meyer, M.T., and Battaglin, W.A., 1997,
Herbicides and their metabolites in rainfall--Origin, transport, and deposition patterns across the midwestern and northeastern United States, 1990-1991: Environmental Science and Technology, v. 31, no. 5, p. 1325-1333, doi:10.1021/es960847o.
Gooseff, M.N., Bencala, K.E., Scott, D.T., Runkel, R.L., and McKnight, D.M., 2005,
Sensitivity analysis of conservative and reactive stream transient storage models applied to field data from multiple-reach experiments: Advances in Water Resources, v. 28, no. 5, p. 479-492, doi:10.1016/j.advwatres.2004.11.012.
Gooseff, M.N., Bencala, K.E., and Wondzell, S.M., 2008,
Solute transport along stream and river networks (Chap. 18), in Rice, S.P., Roy, A.G., and Rhoads, B.L., eds., River Confluences, Tributaries and the Fluvial Network: Hoboken, N.J., John WIley and Sons, Ltd., p. 395-417, ISBN:978-0-470-02672-4.
Gooseff, M.N., Briggs, M.A., Bencala, K.E., McGlynn, B.L., and Scott, D.T., 2013,
Do transient storage parameters directly scale in longer, combined stream reaches?--Reach length dependence of transient storage interpretations: Journal of Hydrology, v. 483, p. 16-25, doi:http://dx.doi.org/10.1016/j.jhydrol.2012.12.046.
Gooseff, M.N., McKnight, D.M., and Runkel, R.L., 2004,
Reach-scale cation exchange controls on major ion chemistry of an Antarctic glacial meltwater stream: Aquatic Geochemistry, v. 10, no. 3-4, p. 221-238, doi:10.1007/s10498-004-2260-4.
Gooseff, M.N., McKnight, D.M., Runkel, R.L., and Duff, J.H., 2004,
Denitrification and hydrologic transient storage in a glacial meltwater stream, McMurdo Dry Valleys, Antarctica: Limnology and Oceanography, v. 49, no. 5, p. 1884-1895.
Gooseff, M.N., McKnight, D.M., Runkel, R.L., and Vaughn, B.H., 2003,
Determining long time-scale hyporheic zone flow paths in Antarctic streams: Hydrological Processes, v. 17, no. 9, p. 1691-1710, doi:10.1002/hyp.1210.

H

Harris, S.H., and Smith, R.L., 2009,
In situ measurements of microbially-catalyzed nitrification and nitrate reduction rates in an ephemeral drainage channel receiving water from coalbed natural gas discharge, Powder River Basin, Wyoming, USA: Chemical Geology, v. 267, no. 1-2, p. 77-84, doi:10.1016/j.chemgeo.2009.01.028.
Hart, R.J., Taylor, H.E., Antweiler, R.C., Graham, D.D., Fisk, G.G., Riggins, S.G., and Flynn, M.E., 2005,
Sediment chemistry of the Colorado River delta of Lake Powell, Utah, 2001: U.S. Geological Survey Open-File Report 2005-1178, 33 p.
Harvey, J.W., 1993,
Measurement of variation in soil-solute tracer concentration across a range of effective pore sizes: Water Resources Research, v. 29, p. 1831-1837, 93WR00529, doi:10.1029/93WR00529.
Harvey, J.W., and Bencala, K.E., 1993,
The effect of streambed topography on surface-subsurface water exchange in mountain catchments: Water Resources Research, v. 29, no. 1, p. 89-98, 92WR01960, doi:10.1029/92WR01960.
Harvey, J.W., Bencala, K.E., and Zellweger, G.W., 1991,
Preliminary investigation of the effect of hillslope hydrology on the mechanics of solute exchange between streams and subsurface gravel zones, in Mallard, G.E., and Aronson, D.A., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the technical meeting, Monterey, California, March 11-15, 1991: U.S. Geological Survey Water-Resources Investigations Report 91-4034, p. 413-418.
Harvey, J.W., Böhlke, J.K., Voytek, M.A., Scott, D., and Tobias, C.R., 2013,
Hyporheic zone denitrification--Controls on effective reaction depth and contribution to whole-stream mass balance: Water Resources Research, v. 49, doi:10.1002/wrcr.20492.
Harvey, J.W., and Fuller, C.C., 1998,
Effect of enhanced manganese oxidation in the hyporheic zone on basin-scale geochemical mass balance: Water Resources Research, v. 34, no. 4, p. 623-636, 97WR03606, doi:10.1029/97WR03606.
Harvey, J.W., Fuller, C.C., and Conklin, M.H., 1999,
Enhanced removal of dissolved manganese in hyporheic zones--Centimeter-scale causes and kilometer-scale consequences, in Morganwalp, D.W., and Buxton, H.T., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the Technical Meeting, Charleston, South Carolina, March 8-12, 1999--Volume 1 of 3--Contamination from Hardrock Mining: U.S. Geological Survey Water-Resources Investigations Report 99-4018A, p. 193-199.
Harvey, J.W., Fuller, C.C., and Wagner, B.J., 1996,
Interactions between shallow ground water and surface water that affect metal transport in Pinal Creek, Arizona, in Morganwalp, D.W., and Aronson, D.A., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the technical meeting, Colorado Springs, Colorado, September 20-24, 1993: U.S. Geological Survey Water-Resources Investigations Report 94-4015, v. 2, p. 1065-1072.
Harvey, J.W., Krupa, S.L., and Krest, J.M., 2004,
Ground water recharge and discharge in the central Everglades: Ground Water, v. 42, no. 7, p. 1090-1102, doi:10.1111/j.1745-6584.2004.tb02646.x.
Harvey, J.W., and Nuttle, W.K., 1995,
Fluxes of water and solute in a coastal wetland sediment 2. Effect of macropores on solute exchange with surface water: Journal of Hydrology, v. 164, no. 1-4, p. 109-125, doi:10.1016/0022-1694(94)02562-P.
Harvey, J.W., and Wagner, B.J., 2000,
Quantifying hydrologic interactions between streams and their subsurface hyporheic zones, in Jones, J.A., and Mulholland, P.J., eds., Streams and Ground Waters: San Diego, Academic Press, p. 3-44.
Harvey, J.W., Wagner, B.J., and Bencala, K.E., 1996,
Evaluating the reliability of the stream tracer approach to characterize stream-subsurface water exchange: Water Resources Research, v. 32, no. 8, p. 2441-51, 96WR01268, doi:10.1029/96WR01268.
Hinkle, S.R., Bencala, K.E., Wentz, D.A., and Krabbenhoft, D.P., 2013,
Mercury and methylmercury dynamics in the hyporheic zone of an Oregon stream: Water, Air, and Soil Pollution, v. 225, no. 1, p. 1-17, doi:10.1007/s11270-013-1694-y.
Hinkle, S.R., Duff, J.H., Triska, F.J., Laenen, A., Gates, E.B., Bencala, K.E., Wentz, D.A., and Silva, S.R., 2001,
Linking hyporheic flow and nitrogen cycling near the Willamette River - a large river in Oregon, USA: Journal of Hydrology, v. 244, no. 3-4, p. 157-180, doi:10.1016/S0022-1694(01)00335-3.
Hladik, M.L., Domagalski, J.L., and Kuivila, K.M., 2009,
Concentrations and loads of suspended sediment-associated pesticides in the San Joaquin River, California and tributaries during storm events: Science of the Total Environment, v. 408, no. 2, p. 356-364, doi:10.1016/j.scitotenv.2009.09.040.
Hladik, M.L., and Kuivila, K.M., 2009,
Assessing the occurrence and distribution of pyrethroids in water and suspended sediments: Journal of Agricultural and Food Chemistry, v. 57, no. 19, p. 9079-9085, doi:10.1021/jf9020448.
Hladik, M.L., and Kuivila, K.M., 2008,
Occurrence of pyrethroids in bed and suspended sediments in California, in Gan, J.J., Spurlock, F., Hendley, P., and Weston, D., eds., Synthetic Pyrethroids--Occurrence and Behavior in Aquatic Environments: ACS Symposium Series 991, p. 55-71.
Holloway, J.M., Smith, R.L., and Nordstrom, D.K., 2004,
Nitrogen transformations in hot spring runoff, Yellowstone National Park, USA, in Wanty, R.B., and Seal, R.R., II, eds., Water-Rock Interaction, Proceedings of the Eleventh International Symposium on Water - Rock Interaction, Saratoga Springs, New York, July 2004: A.A. Balkema, p. 145-148.
Hornberger, M.I., Luoma, S.N., Johnson, M.L., and Holyoak, M., 2009,
Influence of remediation in a mine-impacted river--Metal trends over large spatial and temporal scales: Ecological Applications, v. 19, no. 6, p. 1522-1535, doi:10.1890/08-1529.1.
Horowitz, A.J., Elrick, K.A., and Cook, R.B., 1989,
Source and transport of arsenic in the Whitewood Creek--Belle Fourche--Cheyenne River--Lake Oahe system, South Dakota, in Mallard, G.E., and Ragone, S.E., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the technical meeting, Phoenix, Arizona, September 26-30, 1988: U.S. Geological Survey Water-Resources Investigations Report 88-4220, p. 223-233.
Hostettler, F.D., Rapp, J.B., Kvenvolden, K.A., and Luoma, S.N., 1989,
Organic markers as source discriminants and sediment transport indicators in South San Francisco Bay, California: Geochimica et Cosmochimica Acta, v. 53, no. 7, p. 1,563-1,576, doi:10.1016/0016-7037(89)90238-X.
Hostettler, F.D., Rapp, J.B., Kvenvolden, K.A., and Luoma, S.N., 1988,
Biogenic and anthropogenic organic markers as source discriminants and sediment transport indicators in South San Francisco Bay: U.S. Geological Survey Open-File Report 88-408, 28 p.
Hulseapple, S.M., 1995,
A field study of reareation and solute transport at Pinal Creek, Globe, Arizona: Tucson, University of Arizona, M.S. thesis, 94 p.
Hunerlach, M.P., Alpers, C.N., Marvin-DiPasquale, M., Taylor, H.E., and De Wilde, J.F., 2004,
Geochemistry of mercury and other trace elements in fluvial tailings upstream of Gaguerre Point Dam, Yuba River, California, August 2001: U.S. Geological Survey Scientific Investigations Report 2004-5165, 77 p.
Hunt, R.J., Coplen, T.B., Haas, N.L., Saad, D.A., and Borchardt, M.A., 2005,
Investigating surface water-well interaction using stable isotope ratios of water: Journal of Hydrology, v. 302, no. 1-4, p. 154-172, doi:10.1016/j.jhydrol.2004.07.010.

J

Jackman, A.P., Triska, F.J., and Duff, J.H., 1997,
Hydrologic examination of ground water discharge into the upper Shingobee River, in Winter, T.C., ed., Interdisciplinary Research Initiative--Hydrological and biogeochemical research in the Shingobee River headquarters area, north-central Minnesota: U.S. Geological Survey Water-Resources Investigations Report 96-4215, p. 137-142.
Jakeman, A.J., Hornberger, G.M., Littlewood, I.G., Whitehead, P.G., Harvey, J.W., and Bencala, K.E., 1992,
A systematic approach to modelling the dynamic linkage of climate, physical catchment descriptors, and hydrologic response components: Mathematics and Computers in Simulation, v. 33, p. 359-366, doi:10.1016/0378-4754(92)90122-W.
Jamieson, H.E., Robinson, C., Alpers, C.N., Nordstrom, D.K., Poustovetov, A., and Lowers, H.A., 2005,
The composition of coexisting jarosite-group minerals and water from the Richmond mine, Iron Mountain, California: Canadian Mineralogist, v. 43, no. 4, p. 1225-1242.
Jaynes, D.B., Hatfield, J.L., and Soenksen, P.J., 1994,
Water and chemical transport in surface and tile discharge of Walnut Creek, in Dutton, A.R., ed., Toxic Substances and the Hydrologic Sciences--Proceedings of the conference, Austin, Texas, April 10-13, 1994: Minneapolis, Minn., American Institute of Hydrology, p. 430-445.
Jencso, K.G., McGlynn, B.L., Gooseff, M.N., Bencala, K.E., and Wondzell, S.M., 2010,
Hillslope hydrologic connectivity controls riparian groundwater turnover--Implications of catchment structure for riparian buffering and stream water sources: Water Resources Research, v. 46, no. 10, W10524, doi:10.1029/2009wr008818.
Jencso, K.G., McGlynn, B.L., Gooseff, M.N., Wondzell, S.M., Bencala, K.E., and Marshall, L.A., 2009,
Hydrologic connectivity between landscapes and streams--Transferring reach- and plot-scale understanding to the catchment scale: Water Resources Research, v. 45, no. 4, W04428, doi:10.1029/2008WR007225.
Jobson, H.E., and Carey, W.P., 1988,
Some observations on the interaction of fine sediment with alluvial streambeds, in Mallard, G.E., ed., U.S. Geological Survey Toxic Substances Hydrology Program--Surface-Water Contamination--Proceedings of the technical meeting, Denver, Colorado, February 2-4, 1987: U.S. Geological Survey Open-File Report 87-764, p. 145-156.
Jobson, H.E., and Rathbun, R.E., 1984,
Use of the routing procedure to study dye and gas transport in the West Fork Trinity River, Tex.: U.S. Geological Survey Water-Supply Paper 2252, 21 p.
Johnson, G.P., and Coupe, R.H., 1996,
Transport and concentrations of selected herbicides and nitrate in the Sangamon River, Illinois, April 1991 - March 1992, in Morganwalp, D.W., and Aronson, D.A., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the technical meeting, Colorado Springs, Colorado, September 20-24, 1993: U.S. Geological Survey Water-Resources Investigations Report 94-4015, v. 1, p. 471-478.
Journey, C.A., Burns, D.A., Riva-Murray, K., Brigham, M.E., Button, D.T., Feaster, T.D., Petkewich, M.D., and Bradley, P.M., 2012,
Fluvial transport of mercury, organic carbon, suspended sediment, and selected major ions in contrasting stream basins in South Carolina and New York--October 2004-September 2009: U.S. Geological Survey Scientific Investigations Report 2012-5173, 140 p.

K

Keefe, S.H., Barber, L.B., Runkel, R.L., and Ryan, J.N., 2004,
Fate of volatile organic compounds in constructed wastewater treatment wetlands: Environmental Science and Technology, v. 38, no. 7, p. 2209-2216, doi:10.1021/es034661i.
Keefe, S.H., Barber, L.B., Runkel, R.L., Ryan, J.N., McKnight, D.M., and Wass, R.K., 2004,
Conservative and reactive solute transport in constructed wetlands: Water Resources Research, v. 40, no. 1, W01201, doi:10.1029/2003WR002130.
Kelly, T., and Taylor, H.E., 1996,
Concentrations and loads of selected trace elements and other constituents in the Rio Grande, in the vicinity of Albuquerque, New Mexico, 1994: U.S. Geological Survey Open-File Report 96-126, 45 p.
Kim, B.E., Jackman, A.P., and Triska, F.J., 1992,
Modeling biotic uptake by periphyton and transient hyporrheic storage on nitrate in a natural stream: Water Resources Research, v. 28, no. 10, p. 2,743-2,752, 92WR01229, doi:10.1029/92WR01229.
Kimball, B., and Runkel, R., 2009,
Spatially detailed quantification of metal loading for decision making--Metal mass loading to American Fork and Mary Ellen Gulch, Utah: Mine Water and the Environment, v. 28, no. 4, p. 274-290, doi:10.1007/s10230-009-0085-5.
Kimball, B.A., 1996,
Past and present research on metal transport in St. Kevin Gulch, Colorado, in Morganwalp, D.W., and Aronson, D.A., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the technical meeting, Colorado Springs, Colorado, September 20-24, 1993: U.S. Geological Survey Water-Resources Investigations Report 94-4015, v. 2, p. 753-758.
Kimball, B.A., 1991,
Physical, chemical, and biological processes in waters affected by acid mine drainage--From headwater streams to downstream reservoirs, in Mallard, G.E., and Aronson, D.A., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the technical meeting, Monterey, California, March 11-15, 1991: U.S. Geological Survey Water-Resources Investigations Report 91-4034, p. 365-370.
Kimball, B.A., Bencala, K.E., and Besser, J.M., 1999,
Synthesis of watershed characterization for making remediation decisions, in Morganwalp, D.W., and Buxton, H.T., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the Technical Meeting, Charleston, South Carolina, March 8-12, 1999--Volume 1 of 3--Contamination from Hardrock Mining: U.S. Geological Survey Water-Resources Investigations Report 99-4018A, p. 3-7.
Kimball, B.A., Bencala, K.E., and Broshears, R.E., 1994,
Geochemical processes in the context of hydrologic transport, in Dutton, A.R., ed., Toxic Substances and the Hydrologic Sciences--Proceedings of the conference, Austin, Texas, April 10-13, 1994: Minneapolis, Minn., American Institute of Hydrology, p. 80-94.
Kimball, B.A., Bencala, K.E., McKnight, D.M., and Maura, W.S., 1988,
Geochemistry of dissolved metals in St. Kevin Gulch, an acidic mountain stream near Leadville, Colorado, in Mallard, G.E., ed., U.S. Geological Survey Toxic Substances Hydrology Program--Surface-Water Contamination--Proceedings of the technical meeting, Denver, Colorado, February 2-4, 1987: U.S. Geological Survey Open-File Report 87-764, p. 137-144.
Kimball, B.A., Bencala, K.E., and Runkel, R.L., 2000,
Quantifying effects of metal loading from mine drainage, in Proceedings from the Fifth International Conference on Acid Rock Drainage, Denver, Colorado, May 21-24, 2000: Littleton, Colo., Society for Mining, Metallurgy, and Exploration, p. 1381-1389.
Kimball, B.A., Bianchi, F., Walton-Day, K., Runkel, R.L., Nannucci, M., and Salvadori, A., 2007,
Quantification of changes in metal loading from storm runoff, Merse River (Tuscany, Italy), in Cidu, R., and Frau, F., eds., Water in Mining Environments, Proceedings of the International Mine Water Association Symposium 2007, University of Cagliari, Cagliari, Sardinia, Italy, May 27-31, 2007: p. 83-87.
Kimball, B.A., Bianchi, F., Walton-Day, K., Runkel, R.L., Nannucci, M., and Salvadori, A., 2007,
Quantification of changes in metal loading from storm runoff, Merse River (Tuscany, Italy): Mine Water and the Environment, v. 26, no. 4, p. 209-216, doi:10.1007/s10230-007-0020-6.
Kimball, B.A., Broshears, R.E., Bencala, K.E., and McKnight, D.M., 1994,
Coupling of hydrologic transport and chemical reactions in a stream affected by acid mine drainage: Environmental Science and Technology, v. 28, no. 12, p. 2065-73, doi:10.1021/es00061a014.
Kimball, B.A., Broshears, R.E., Bencala, K.E., and McKnight, D.M., 1991,
Comparison of rates of hydrologic and chemical processes in a stream affected by acid mine drainage, in Mallard, G.E., and Aronson, D.A., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the technical meeting, Monterey, California, March 11-15, 1991: U.S. Geological Survey Water-Resources Investigations Report 91-4034, p. 407-412.
Kimball, B.A., Broshears, R.E., McKnight, D.M., and Bencala, K.E., 1994,
Effects of instream pH modification on transport of sulfide-oxidation products, in Alpers, C.N., and Blowes, D.W., eds., Environmental chemistry of sulfide oxidation: Washington, D.C., American Chemical Society ACS Symposium Series 550, p. 224-243.
Kimball, B.A., Broshears, R.E., McKnight, D.M., and Bencala, K.E., 1993,
Preliminary evaluation of the effects of an instream pH modification on transport of sulfide-oxidation products, in Alpers, C.N., and Blowes, D.W., eds., Environmental Chemistry of Sulfide Oxidation: Washington, D.C., American Chemical Society ACS Symposium Series 550, p. 224-243.
Kimball, B.A., Callender, E., and Axtmann, E.V., 1995,
Effects of colloids on metal transport in a river receiving acid mine drainage, Upper Arkansas River, Colorado, U.S.A.: Applied Geochemistry, v. 10, no. 3, p. 285-306, doi:10.1016/0883-2927(95)00011-8.
Kimball, B.A., and Church, S.E., 1997,
Effects of colloidal iron and aluminum on the transport and transformation of metals in rivers affected by mine drainage, in Proceedings of the U.S. Geological Survey (USGS) Sediment Workshop, "Expanding Sediment Research Capabilities in Today's USGS", Reston, VA, and Harpers Ferry, WV, February 4-7, 1997: U.S. Geological Survey.
Kimball, B.A., Johnson, K.K., Runkel, R.L., and Steiger, J.I., 2004,
Quantification of metal loading to Silver Creek through the Silver Maple Claims area, Park City, Utah, May 2002: U.S. Geological Survey Water-Resources Investigations Report 03-4296, 39 p.
Kimball, B.A., and McKnight, D.M., 1989,
Metal partitioning and photoreduction of iron in filtrates of acid streamwater, St. Kevin Gulch, Leadville, Colorado, in Mallard, G.E., and Ragone, S.E., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the technical meeting, Phoenix, Arizona, September 26-30, 1988: U.S. Geological Survey Water-Resources Investigations Report 88-4220, p. 93-100.
Kimball, B.A., McKnight, D.M., Broshears, R.E., and Bencala, K.E., 1992,
Effect of instream pH modification on aluminum, in Kharaka, Y.K., and Maest, A.S., eds., Low temperature environments, v. 1 of Water-rock interaction--Proceedings of the 7th International Symposium on Water-Rock Interaction--WRI-7, Park City Utah, July 13-18, 1992: Rotterdam, A.A. Balkema, p. 393-396.
Kimball, B.A., McKnight, D.M., Wetherbee, G.A., and Harnish, R.A., 1992,
Mechanisms of iron photoreduction in a metal-rich, acidic stream (St. Kevin Gulch, Colorado, USA): Chemical Geology, v. 96, no. 1-2, p. 227-239, doi:10.1016/0009-2541(92)90130-W.
Kimball, B.A., Nimick, D.A., Gerner, L.J., and Runkel, R.L., 1999,
Quantification of metal loading in Fisher Creek by tracer injection and synoptic sampling, Park County, Montana, August 1997: U.S. Geological Survey Water-Resources Investigations Report 99-4119, 40 p.
Kimball, B.A., Nordstrom, D.K., Runkel, R.L., and Verplanck, P.L., 2006,
Questa baseline and pre-mining ground-water quality investigation. 23. Quantification of solute mass loading for Red River, New Mexico: U.S. Geological Survey Scientific Investigations Report 2006-5004.
Kimball, B.A., Runkel, R.L., Bencala, K.E., and Walton-Day, K.E., 1999,
Use of tracer-injection and synoptic-sampling studies to quantify effects of metal loading from mine drainage, in Morganwalp, D.W., and Buxton, H.T., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the Technical Meeting, Charleston, South Carolina, March 8-12, 1999--Volume 1 of 3--Contamination from Hardrock Mining: U.S. Geological Survey Water-Resources Investigations Report 99-4018A, p. 31-36.
Kimball, B.A., Runkel, R.L., Cleasby, T.E., and Nimick, D.A., 2004,
Quantification of metal loading by tracer injection and synoptic sampling, 1997-98 (Chapter D6), in Nimick, D.A., Church, S.E., and Finger, S.E., eds., Integrated investigations of environmental effects of historical mining in the Basin and Boulder Mining Districts, Boulder River watershed, Jefferson County, Montana: U.S. Geological Survey Professional Paper 1652, p. 191-262.
Kimball, B.A., Runkel, R.L., and Gerner, L.J., 2001,
Quantification of mine-drainage inflows to Little Cottonwood Creek, Utah, using a tracer-injection and synoptic-sampling study: Environmental Geology, v. 40, p. 1390-1404, doi:10.1007/s002540100320.
Kimball, B.A., Runkel, R.L., and Gerner, L.J., 1999,
Quantification of metal loading in French Gulch, Summit County, Colorado, using a tracer-injection study, July 1999: U.S. Geological Survey Water-Resources Investigations Report 98-4078, 38 p.
Kimball, B.A., Runkel, R.L., and Walton-Day, K., 2010,
An approach to quantify sources, seasonal change, and biogeochemical processes affecting metal loading in streams--Facilitating decisions for remediation of mine drainage: Applied Geochemistry, v. 25, no. 5, p. 728-740, doi:10.1016/j.apgeochem.2010.02.005.
Kimball, B.A., Runkel, R.L., and Walton-Day, K., 2008,
Principal locations of major-ion, trace-element, nitrate, and Escherichia coli loading to Emigration Creek, Salt Lake County, Utah, October 2005: U.S. Geological Survey Scientific Investigations Report 2008-5043, 33 p.
Kimball, B.A., Runkel, R.L., and Walton-Day, K., 2007,
Principal locations of metal loading from flood-plain tailings, Lower Silver Creek, Utah, April 2004: U.S. Geological Survey Scientific Investigations Report 2007-5248, 33 p.
Kimball, B.A., Runkel, R.L., and Walton-Day, K., 2004,
Evaluation of remediation alternatives in streams affected by acidic, metal-rich drainage, in Wanty, R.B., and Seal III, R.R., eds., Proceedings of the Eleventh International Symposium on Water-Rock Interaction WRI-II, Saratoga Springs, New York, June 27-July 2, 2004: A.A. Balkema, p. 1551-1555.
Kimball, B.A., Runkel, R.L., and Walton-Day, K., 2003,
Use of field-scale experiments and reactive transport modeling to evaluate remediation alternatives in streams affected by acid mine drainage, in Jambor, J.L., Blowes, D.W., and Ritchie, A.I.M., eds., Environmental Aspects of Mine Wastes: Mineralogical Association of Canada, Short Course Series, v. 31, p. 261-282.
Kimball, B.A., Runkel, R.L., Walton-Day, K., and Bencala, K.E., 2002,
Assessment of metal loads in watersheds affected by acid mine drainage by using tracer injection and synoptic sampling--Cement Creek, Colorado, USA: Applied Geochemistry, v. 17, no. 9, p. 1183-1207, doi:10.1016/S0883-2927(02)00017-3.
Kimball, B.A., Runkel, R.L., Walton-Day, K., and Stover, B.K., 2006,
Evaluation of metal loading to streams near Creede, Colorado, August and September 2000: U.S. Geological Survey Scientific Investigations Report 2004-5143, 64 p.
Kimball, B.A., Runkel, R.L., Walton-Day, K., and Williamson, J.E., 2006,
Quantification of mass loading to Strawberry Creek near the Gilt Edge mine, South Dakota: U.S. Geological Survey Scientific Investigations Report 2006-5006, 41 p.
Kimball, B.A., Runkel, R.L., Wanty, R.B., and Verplanck, P.L., 2010,
Reactive solute-transport simulation of pre-mining metal concentrations in mine-impacted catchments--Redwell Basin, Colorado, USA: Chemical Geology, v. 269, no. 1-2, p. 124-136, doi:10.1016/j.chemgeo.2009.05.024.
Kimball, B.A., Walton-Day, K., and Runkel, R.L., 2007,
Quantification of metal loading by tracer injection and synoptic sampling, 1996-2000 (Chapter E9), in Church, S.E., von Guerard, P., and Finger, S.E., eds., Integrated Investigations of Environmental Effects of Historical Mining in the Animas River Watershed, San Juan County, Colorado: U.S. Geological Survey Professional Paper 1651, v. 1, p. 417-495.
Kimball, B.A., and Wetherbee, G.A., 1989,
Instream chemical reactions of acid mine water entering a neutral stream near Leadville, Colorado, in Mallard, G.E., and Ragone, S.E., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the technical meeting, Phoenix, Arizona, September 26-30, 1988: U.S. Geological Survey Water-Resources Investigations Report 88-4220, p. 71-79.
Knightes, C.D., Golden, H.E., Journey, C.A., Davis, G.M., Conrads, P.A., Marvin-DiPasquale, M., Brigham, M.E., and Bradley, P.M., 2014,
Mercury and methylmercury stream concentrations in a coastal plain watershed--A multi-scale simulation analysis: Environmental Pollution, v. 187, p. 182-192, doi:10.1016/j.envpol.2013.12.026.
Kolpin, D.W., 2000,
Importance of the Mississippi River Basin for investigating agricultural--chemical contamination of the hydrologic cycle: The Science of the Total Environment, v. 248, no. 2-3, p. 71-72, doi:10.1016/S0048-9697(99)00530-6.
Kuivila, K.M., and Copeland, D.D., 1996,
Diazinon concentrations and transport in the Sacramento River and San Francisco Bay, California, February 1993, in Morganwalp, D.W., and Aronson, D.A., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the technical meeting, Colorado Springs, Colorado, September 20-24, 1993: U.S. Geological Survey Water-Resources Investigations Report 94-4015, v. 2, p. 699-704.
Kuivila, K.M., and Foe, C.G., 1995,
Concentrations, transport, and biological effects of dormant spray pesticides in the San Francisco Estuary, California: Environmental Toxicology and Chemistry, v. 14, no. 7, p. 1141-1150.
Kuivila, K.M., and Hladik, M.L., 2008,
Understanding the occurrence and transport of current-use pesticides in the San Francisco Estuary watershed: San Francisco Estuary and Watershed Science, v. 6, no. 3, Article 2.
Kuivila, K.M., and Jennings, B.E., 2007,
Input, flux, and persistence of six select pesticides in San Francisco Bay: International Journal of Environmental Analytical Chemistry, v. 87, no. 13, p. 897-911, doi:10.1080/03067310701619014.
Kuwabara, J.S., Chang, C.C.Y., and Pasilis, S.P., 2004,
Effects of benthic fauna on arsenic transport in Whitewood Creek, South Dakota, in Kuwabara, J.S., and Fuller, C.C., eds., Toxic Substances in Surface Waters and Sediments--A Study to Assess the Effects of Arsenic-Contaminated Alluvial Sediment in Whitewood Creek, South Dakota: U.S. Geological Survey Professional Paper 1681, p. 1-26.
Kuwabara, J.S., Chang, C.C.Y., and Pasilis, S.P., 1990,
Effects of benthic flora on arsenic transport: Journal of Environmental Engineering, v. 116, p. 394-409.
Kuwabara, J.S., Chang, C.C.Y., and Pasilis, S.P., 1989,
Periphyton effects on arsenic transport in Whitewood Creek, South Dakota, in Mallard, G.E., and Ragone, S.E., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the technical meeting, Phoenix, Arizona, September 26-30, 1988: U.S. Geological Survey Water-Resources Investigations Report 88-4220, p. 247-255.
Kuwabara, J.S., Chang, C.C.Y., and Pasilis, S.P., 1988,
Effects of algal growth on arsenic transport in Whitewood Creek, South Dakota--Preliminary results, in Mallard, G.E., ed., U.S. Geological Survey Toxic Substances Hydrology Program--Surface-Water Contamination--Proceedings of the technical meeting, Denver, Colorado, February 2-4, 1987: U.S. Geological Survey Open-File Report 87-764, p. 33-38.
Kuwabara, J.S., and Helliker, P., 1988,
Trace contaminants in streams (chap. 26), in Cheremisinoff, P.N., Cheremisinoff, N.P., and Cheng, S.L., eds., Water Resources/Environmental, v. 5 of Civil Engineering Practice: Lancaster, Pennsylvania, Technomic Press, p. 739-766.
Kuwabara, J.S., Leland, H.V., and Bencala, K.E., 1984,
Copper transport along a Sierra Nevada stream: Journal of Environmental Engineering, v. 110, p. 646-655.
Kuwabara, J.S., Topping, B.R., Woods, P.F., and Carter, J.L., 2007,
Free zinc ion and dissolved orthophosphate effects on phytoplankton from Coeur d'Alene Lake, Idaho: Environmental Science and Technology, v. 41, no. 8, p. 2811-2817, doi:10.1021/es062923l.

L

Laenan, A., and Bencala, K.E., 2001,
Transient storage assessments of dye-tracer injections in rivers of the Willamette Basin, Oregon: Journal of the American Water Resources Association, v. 37, no. 2, p. 367-377, doi:10.1111/j.1752-1688.2001.tb00975.x.
Landmeyer, J.E., Bradley, P.M., Trego, D.A., Hale, K.G., and II, J.E.H., 2010,
MTBE, TBA, and TAME attenuation in diverse hyporheic zones: Ground Water, v. 48, no. 1, p. 30-41, doi:10.1111/j.1745-6584.2009.00608.x.
Landmeyer, J.E., Tanner, T.L., and Watt, B.E., 2004,
Biotransformation of tributyltin to tin in freshwater river-bed sediments contaminated by an organotin release: Environmental Science and Technology, v. 38, no. 15, p. 4106-4112, doi:10.1021/es030697z.
Lawrence, G.B., Goolsby, D.A., Battaglin, W.A., and Stensland, G.J., 2000,
Atmospheric nitrogen in the Mississippi River Basin--emissions, deposition and transport: The Science of the Total Environment, v. 248, no. 2-3, p. 87-99, doi:10.1016/S0048-9697(99)00533-1.
Lee, C.J., Rasmussen, P.P., Ziegler, A.C., and Fuller, C.C., 2008,
Transport and sources of suspended sediment in the Mill Creek watershed, Johnson County, northeast Kansas, 2006-07: U.S. Geological Survey Scientific Investigations Report 2009-5001, 52 p.
Leenheer, J.A., 1998,
Water quality issues in the Mississippi River, 1987-1992, in Proceedings of The Delta, Connecting Points of View for Sustainable Natural Resources, Memphis, Tennessee, August 13-16, 1998: p. 519-522.
Leenheer, J.A., Barber, L.B., Rostad, C.E., and Noyes, T.I., 1995,
Data on natural organic substances in dissolved, colloidal, suspended-silt, and -clay and bed-sediment phases in the Mississippi River and some of its tributaries, 1991-92: U.S. Geological Survey Water-Resources Investigations Report 94-4191, 47 p.
Leenheer, J.A., Izbicki, J.A., Rostad, C.E., Noyes, T.I., and Woodside, G., 2008,
Discovery of cyanuric acid during an assessment of natural organic matter in stormflow water of the Santa Ana River, southern California, 2003-2004: U.S. Geological Survey Scientific Investigations Report 2007-5048, 13 p.
Leenheer, J.A., Noyes, T.I., and Brown, P.A., 1995,
Data on natural organic substances in dissolved, colloidal, suspended-silt and clay, and bed-sediment phases in the Mississippi River and some of its tributaries, 1987-4204: U.S. Geological Survey Water-Resources Investigations Report 93-4204, 71 p.
Liszewski, M.J., and Squillace, P.J., 1991,
The effect of surface-water and ground-water exchange on the transport and storage of atrazine in the Cedar River, Iowa, in Mallard, G.E., and Aronson, D.A., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the technical meeting, Monterey, California, March 11-15, 1991: U.S. Geological Survey Water-Resources Investigations Report 91-4034, p. 195-202.
Lozano, N., Rice, C.P., Pagano, J., Zintek, L., Barber, L.B., Murphy, E.W., Nettesheim, T., Minarik, T., and Schoenfuss, H.L., 2012,
Concentration of organic contaminants in fish and their biological effects in a wastewater-dominated urban stream: Science of the Total Environment, v. 420, p. 191-201, doi:10.1016/j.scitotenv.2011.12.059.
Lucas, L.V., 2010,
Implications of estuarine transport for water quality, in Valle-Levinso, A., ed., Contemporary Issues in Estuarine Physics: New York, Cambridge University Press, p. 273-307, ISBN:9780521899673.
Luoma, S.N., and Presser, T.S., 2009,
Emerging opportunities in management of selenium contamination: Environmental Science and Technology, v. 43, no. 22, p. 8483-8487, doi:10.1021/es900828h.
Luoma, S.N., and Rainbow, P.S., 2005,
Why is metal bioaccumulation so variable? Biodynamics as a unifying concept: Environmental Science and Technology, v. 39, no. 7, p. 1921-1931, doi:10.1021/es048947e.

M

Marron, D.C., 1989,
The transport of mine tailings as suspended sediment in the Belle Fourche River, west-central South Dakota, USA: International Association of Hydrological Sciences (IAHS) Publication no. 184 (Sediment and the Environment), p. 19-26.
Marron, D.C., 1988,
Transport and flood-plain storage of metals associated with sediment downstream from Lead, South Dakota, in Mallard, G.E., ed., U.S. Geological Survey Toxic Substances Hydrology Program--Surface-Water Contamination--Proceedings of the technical meeting, Denver, Colorado, February 2-4, 1987: U.S. Geological Survey Open-File Report 87-764, p. 11-12.
Marvin-DiPasquale, M., Lutz, M.A., Brigham, M.E., Krabbenhoft, D.P., Aiken, G.R., Orem, W.H., and Hall, B.D., 2009,
Mercury cycling in stream ecosystems--2. Benthic methylmercury production and bed sediment-pore water partitioning: Environmental Science and Technology, v. 43, no. 8, p. 2,726-2,732, doi:10.1021/es802698v.
Massey, L.B., Haggard, B.E., Galloway, J.M., Loftin, K.A., Meyer, M.T., and Green, W.R., 2010,
Antibiotic fate and transport in three effluent-dominated Ozark streams: Ecological Engineering, v. 36, no. 7, p. 930-938, doi:10.1016/j.ecoleng.2010.04.009.
McClain, M.E., Bilby, R.E., and Triska, F.J., 1998,
Chapter 14 - Biogeochemical cycles of nitrogen, phosphorus, and sulfur--Natural distributions and response to disturbance, in Naiman, R.J., ed., The Ecology and Management of Rivers and Streams in the Pacific Northwest Ecoregion: New York, Springer-Verlag, p. 347-372.
McCleskey, R.B., Nordstrom, D.K., Susong, D.D., Ball, J.W., and Holloway, J.M., 2010,
Source and fate of inorganic solutes in the Gibbon River, Yellowstone National Park, Wyoming, USA--I. Low-flow discharge and major solute chemistry: Journal of Volcanology and Geothermal Research, v. 193, no. 3-4, p. 189-202, doi:10.1016/j.jvolgeores.2010.03.014.
McCleskey, R.B., Nordstrom, D.K., Susong, D.D., Ball, J.W., and Taylor, H.E., 2010,
Source and fate of inorganic solutes in the Gibbon River, Yellowstone National Park, Wyoming, USA--II. Trace element chemistry: Journal of Volcanology and Geothermal Research, v. 196, no. 3-4, p. 139-155, doi:10.1016/j.jvolgeores.2010.05.004.
McDonald, E.T., and Cheng, R.T., 1994,
Issues related to modeling the transport of suspended sediments in northern San Francisco Bay, California, in The proceedings of the Third International Conference on Estuarine and Coastal Modeling: Chicago, Illinois, American Society of Civil Engineers, p. 551-564.
McKnight, D.M., and Bencala, K.E., 1990,
The chemistry of iron, aluminum, and dissolved organic material in three acidic, metal-enriched, mountain streams, as controlled by watershed and in-stream processes: Water Resources Research, v. 26, no. 12, p. 3087-3100, 90WR01510, doi:10.1029/WR026i012p03087.
McKnight, D.M., Bencala, K.E., Harnish, R.A., and Runkel, R.L., 1996,
Difficulties with intermediate-scale experiments for studies of iron chemistry in streams affected by acidic mine drainage, in Morganwalp, D.W., and Aronson, D.A., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the technical meeting, Colorado Springs, Colorado, September 20-24, 1993: U.S. Geological Survey Water-Resources Investigations Report 94-4015, v. 2, p. 789-796.
McKnight, D.M., Bencala, K.E., Zellweger, G.W., Aiken, G.R., Feder, G.L., and Thorn, K.A., 1992,
Sorption of dissolved organic material by hydrous aluminum and iron oxides occurring at the confluence of Deer Creek with the Snake River, Summit County, Colorado: Environmental Science and Technology, v. 26, no. 7, p. 1388-1396, doi:10.1021/es00031a017.
McKnight, D.M., Hornberger, G.M., Bencala, K.E., and Boyer, E.W., 2002,
In-stream sorption of fulvic acid in an acidic stream--A stream-scale transport experiment: Water Resources Research, v. 38, no. 1, p. 6-1 - 6-12, doi:10.1029/2001WR000269.
McKnight, D.M., Kimball, B.A., and Bencala, K.E., 1988,
Iron photoreduction and oxidation in an acidic mountain stream: Science, v. 240, no. 4852, p. 637-640, doi:10.1126/science.240.4852.637.
McKnight, D.M., Kimball, B.A., and Bencala, K.E., 1988,
Photoreduction of hydrous iron oxides in acidic mountain streams in Colorado, in Mallard, G.E., ed., U.S. Geological Survey Toxic Substances Hydrology Program--Surface-Water Contamination--Proceedings of the technical meeting, Denver, Colorado, February 2-4, 1987: U.S. Geological Survey Open-File Report 87-764, p. 131-136.
McKnight, D.M., Kimball, B.A., and Runkel, R.L., 2001,
pH dependence of iron photoreduction in a Rocky Mountain stream affected by acid mine drainage: Hydrological Processes, v. 15, no. 10, p. 1979-1992, doi:10.1002/hyp.251.
McKnight, D.M., Runkel, R.L., Tate, C.M., Duff, J.H., and Moorhead, D.L., 2004,
Inorganic N and P dynamics of Antarctic glacial meltwater streams as controlled by hyporheic exchange and benthic autotrophic communities: Journal of the North American Benthological Society, v. 23, no. 2, p. 171-188.
McKnight, D.M., Smith, R.L., Harnish, R.A., Miller, C.L., and Bencala, K.E., 1993,
Seasonal relationships between planktonic microorganisms and dissolved organic material in an alpine stream: Biogeochemistry, v. 21, p. 39-59.
McKnight, D.M., Wershaw, R.L., Bencala, K.E., Zellweger, G.W., and Feder, G.L., 1992,
Humic substances and trace metals associated with Fe and Al oxides deposited in an acidic mountain stream: The Science of the Total Environment, v. 117/118, p. 485-498, doi:10.1016/0048-9697(92)90113-7.
McMahon, P.B., and Böhlke, J.K., 1996,
Denitrification and mixing in a stream--aquifer system--Effects on nitrate loading to surface water: Journal of Hydrology, v. 186, no. 1-4, p. 105-128, doi:10.1016/S0022-1694(96)03037-5.
McMahon, P.B., Tindall, J.A., Collins, J.A., Lull, K.J., and Nuttle, J.R., 1995,
Hydrologic and geochemical effects on oxygen uptake in bottom sediments of an effluent-dominated river: Water Resources Research, v. 31, no. 10, p. 2,561-2,569, 95WR02106, doi:10.1029/95WR02106.
Meade, R.H., and Leenheer, J.A., 1995,
Executive summary, in Meade, R.H., ed., Contaminants in the Mississippi River, 1987-1992: U.S. Geological Survey Circular 1133, p. 1-10.
Metge, D.W., Harvey, R.W., Aiken, G.R., Anders, R., Lincoln, G., and Jasperse, J., 2010,
Influence of organic carbon loading, sediment associated metal oxide content and sediment grain size distributions upon Cryptosporidium parvum removal during riverbank filtration operations, Sonoma County, CA: Water Research, v. 44, no. 4, p. 1126-1137, doi:10.1016/j.watres.2009.11.033.
Meyer, M.T., 1994,
Geochemistry of cyanazine and its metabolites--Indicators of contaminant transport in surface water of the midwestern United States: Lawrence, University of Kansas, Department of Geology, Ph.D. thesis, 364 p.
Meyer, M.T., Scribner, E.A., and Kalkhoff, S.J., 2007,
Comparison of fate and transport of isoxaflutole to atrazine and metolachlor in 10 Iowa rivers: Environmental Science and Technology, v. 41, no. 20, p. 6933-6939, doi:10.1021/es070903t.
Meyer, M.T., and Thurman, E.M., 1996,
The transport and degradation of cyanazine metabolites in surface water of the Midwestern United States, in Morganwalp, D.W., and Aronson, D.A., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the technical meeting, Colorado Springs, Colorado, September 20-24, 1993: U.S. Geological Survey Water-Resources Investigations Report 94-4015, v. 1, p. 463-470.
Meyer, M.T., Thurman, E.M., and Goolsby, D.A., 1996,
Cyanazine, atrazine, and their metabolites as geochemical indicators of contaminant transport in the Mississippi River, in Meyer, M.T., and Thurman, E.M., eds., Herbicide metabolites in surface water and groundwater: Washington, D.C., American Chemical Society ACS Symposium Series 630, p. 288-303.
Mitchell, M.J., Piatek, K.B., Christopher, S., Mayer, B., Kendall, C., and McHale, P., 2006,
Solute sources in stream water during consecutive fall storms in a northern hardwood forest watershed--A combined hydrological, chemical and isotopic approach: Biogeochemistry, v. 78, p. 217-246, doi:10.1007/s10533-005-4277-1.
Morris, J.M., Farag, A.M., Nimick, D.A., and Meyer, J.S., 2006,
Light-mediated Zn uptake in photosynthetic biofilm: Hydrobiologia, v. 571, p. 361-371, doi:10.1007/s10750-006-0261-6.
Morris, J.M., and Meyer, J.S., 2007,
Photosynthetically mediated Zn removal from the water column in High Ore Creek, Montana: Water, Air, and Soil Pollution, v. 179, no. 1-4, p. 391-395, doi:10.1007/s11270-006-9232-9.
Morris, J.M., and Meyer, J.S., 2006,
Extracellular and intracellular uptake of zinc in a photosynthetic biofilm matrix: Bulletin of Environmental Contamination and Toxicology, v. 77, no. 1, p. 30-35, doi:10.1007/s00128-006-1028-5.
Morris, J.M., Nimick, D.A., Farag, A.M., and Meyer, J.S., 2005,
Does biofilm contribute to diel cycling of Zn in High Ore Creek, Montana?: Biogeochemistry, v. 76, no. 2, p. 233-259, doi:10.1007/s10533-005-4774-2.
Myhre, S.H., and Bencala, K.E., 1998,
Surface-water quality data--Permanante and Saratoga Creeks, Santa Clara Valley, California, water year 1997: U.S. Geological Survey Open-File Report 98-4, 39 p.

N

Nimick, D.A., Caldwell, R.R., Skaar, D.R., and Selch, T.M., 2013,
Fate of geothermal mercury from Yellowstone National Park in the Madison and Missouri rivers, USA: Science of the Total Environment, v. 443, p. 40-54, doi:10.1016/j.scitotenv.2012.10.080.
Nimick, D.A., and Gammons, C.H., 2011,
Preface--Diel biogeochemical processes in terrestrial waters: Chemical Geology, v. 283, no. 1-2, p. 1-2, doi:10.1016/j.chemgeo.2011.01.023.
Nimick, D.A., Gammons, C.H., and Parker, S.R., 2011,
Diel biogeochemical processes and their effect on the aqueous chemistry of streams--A review: Chemical Geology, v. 283, no. 1-2, p. 3-17, doi:10.1016/j.chemgeo.2010.08.017.
Nimick, D.A., Harper, D.D., Farag, A.M., Cleasby, T.E., Macconnell, E., and Skaar, D., 2007,
Influence of in-stream diel concentration cycles of dissolved trace metals on acute toxicity to one-year-old cutthroat trout (Oncorhynchus clarki lewisi): Environmental Toxicology and Chemistry, v. 26, no. 12, p. 2667-2678, doi:10.1897/07-265.1.
Nimick, D.A., McCleskey, R.B., Gammons, C.H., and Parker, S.R., 2007,
Diel mercury concentration cycles in streams affected by mining and geothermal discharge: Science of the Total Environment, v. 373, no. 1, p. 344-355, doi:10.1016/j.scitotenv.2006.11.008.
Niswonger, R.G., Prudic, D.E., Pohll, G., and Constantz, J., 2005,
Incorporating seepage losses into the unsteady streamflow equations for simulating intermittent flow along mountain front streams: Water Resources Research, v. 41, W06006, doi:10.1029/2004WR003677.
Niyogi, D.K., McKnight, D.M., Lewis, W.M., Jr, and Kimball, B.A., 1999,
Experimental diversion of acid mine drainage and the effects on a headwater stream, in Morganwalp, D.W., and Buxton, H.T., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the Technical Meeting, Charleston, South Carolina, March 8-12, 1999--Volume 1 of 3--Contamination from Hardrock Mining: U.S. Geological Survey Water-Resources Investigations Report 99-4018A, p. 123-130.
Nordstrom, D.K., 2005,
A river on the edge--Water quality in the Red River and the USGS background study, in Price, L.G., Bland, D., McLemore, V.T., and Barker, J.M., eds., Mining in New Mexico, Decision-Makers Conference 2005, Taos region, Socorro, New Mexico: New Mexico Bureau of Geology and Mineral Resources, p. 64-67.
Nordstrom, D.K., Alpers, C.N., Coston, J.A., Taylor, H.E., McCleskey, R.B., Ball, J.W., Ogle, S.A., Cotsifas, J.S., and Davis, J.A., 1999,
Geochemistry, toxicity, and sorption properties of contaminated sediments and pore waters from two reservoirs receiving acid mine drainage, in Morganwalp, D.W., and Buxton, H.T., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the Technical Meeting, Charleston, South Carolina, March 8-12, 1999--Volume 1 of 3--Contamination from Hardrock Mining: U.S. Geological Survey Water-Resources Investigations Report 99-4018A, p. 289-296.
Nordstrom, D.K., Wright, W.G., Mast, M.A., Bove, D.J., and Rye, R.O., 2007,
Aqueous-sulfate stable isotopes--A study of mining-affected and undisturbed acidic drainage (Chapter E8), in Church, S.E., von Guerard, P.B., and Finger, S.E., eds., Integrated Investigations of Environmental Effects of Historical Mining in the Animas River Watershed, San Juan County, Colorado: U.S. Geological Survey Professional Paper 1651, v. 1, p. 387-416.
Nuttle, W.K., and Harvey, J.W., 1995,
Fluxes of water and solute in a coastal wetland sediment 1. The contribution of regional groundwater discharge: Journal of Hydrology, v. 164, no. 1-4, p. 89-107, doi:10.1016/0022-1694(94)02561-O.

O

O'Donnell, J.A., Aiken, G.R., Kane, E.S., and Jones, J.B., 2010,
Source water controls on the character and origin of dissolved organic matter in streams of the Yukon River basin, Alaska: Journal of Geophysical Research, v. 115, no. G3, p. G03025, doi:10.1029/2009jg001153.
Ohte, N., Dahlgren, R.A., Silva, S.R., Kendall, C., Kratzer, C.R., and Doctor, D.H., 2007,
Sources and transport of algae and nutrients in a Californian river in a semi-arid climate: Freshwater Biology, v. 52, no. 12, p. 2,476-2,493, doi:10.1111/j.1365-2427.2007.01849.x.
Oltmann, R.N., 1996,
Hydrodynamics of California's Sacramento-San Joaquin Delta, and the collection of flow data for the tracking of pesticides, in Morganwalp, D.W., and Aronson, D.A., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the technical meeting, Colorado Springs, Colorado, September 20-24, 1993: U.S. Geological Survey Water-Resources Investigations Report 94-4015, v. 2, p. 695-698.
Ortiz, R.F., and Ball, J.W., 2003,
Summary of synoptic sampling and tracer-injection tests in the Alamosa River Basin during low-flow conditions, October 1998--A sampling analysis report for modeling reactive transport of metals for the Summitville Mine: U.S. Geological Survey Open-File Report 03-466, 55 p.
Ortiz, R.F., and Ball, J.W., 2003,
Summary of synoptic sampling and tracer-injection tests in the Alamosa River basin during high-flow conditions, June 1999--A sampling analysis report for modeling reactive transport of metals for the Summitville Mine, Colorado: U.S. Geological Survey Open-File Report 03-467, 60 p.
Ortiz, R.F., and Bencala, K.E., 2001,
Determination of instream metal loads using tracer-injection and synoptic-sampling techniques in Wightman Fork, southwestern Colorado, September 1997: U.S. Geological Survey Water-Resources Investigations Report 00-4154, 26 p.
Osborne, L.L., Bayley, P.B., Higler, L.W.G., Statzner, B., Triska, F., and Iverson, T.M., 1993,
Restoration of lowland streams--An introduction: Freshwater Biology, v. 29, p. 187-194.

P

Packman, A.I., and Bencala, K.E., 2000,
Modeling surface - subsurface hydrologic interactions, in Jones, J.B., and Mulholland, P.J., eds., Streams and Ground Waters: Academic Press, p. 45-80.
Parker, S.R., Gammons, C.H., Poulson, S.R., and DeGrandpre, M.D., 2007,
Diel variations in stream chemistry and isotopic composition of dissolved inorganic carbon, upper Clark Fork River, Montana, USA: Applied Geochemistry, v. 22, no. 7, p. 1329-1343, doi:10.1016/j.apgeochem.2007.02.007.
Parker, S.R., Poulson, S.R., Gammons, C.H., and DeGrandpre, M.D., 2005,
Biogeochemical controls on diel cycling of stable isotopes of dissolved 02 and dissolved inorganic carbon in the Big Hole River, Montana: Environmental Science and Technology, v. 39, no. 18, p. 7134-7140, doi:10.1021/es0505595.
Paschke, S.S., Kimball, B.A., and Runkel, R.L., 2005,
Quantification and simulation of metal loading to the Upper Animas River, Eureka to Silverton, San Juan County, Colorado, September 1997 and August 1998: U.S. Geological Survey Scientific Investigations Report 2005-5054, 73 p.
Paschke, S.S., Runkel, R.L., Walton-Day, K., Kimball, B.A., and Schaffrath, K.R., 2013,
Streamflow and water-quality conditions including geologic sources and processes affecting selenium loading in the Toll Gate Creek watershed, Aurora, Arapahoe County, Colorado, 2007: U.S. Geological Survey Scientific Investigations Report 2012-5280, 108 p.
Paulson, A.J., Konrad, C.P., Frans, L.M., Noble, M.A., Kendall, c., Josberger, E.G., Huffman, R.L., and Olsen, T.D., 2006,
Freshwater and saline loads of dissolved inorganic nitrogen to Hood Canal and Lynch Cove, western Washington: U.S. Geological Survey Scientific Investigations Report 2006-5106, 91 p.
Pellerin, B.A., Saraceno, J.F., Shanley, J.B., Sebestyen, S.D., Aiken, G.R., Wollheim, W.M., and Bergamaschi, B.A., 2012,
Taking the pulse of snowmelt: In situ sensors reveal seasonal, event and diurnal patterns of nitrate and dissolved organic matter variability in an upland forest stream: Biogeochemistry, v. 108, no. 1-3, p. 183-198, doi:10.1007/s10533-011-9589-8.
Pereira, W.E., Moody, J.A., Hostettler, F.D., Rostad, C.E., and Leiker, T.J., 1995,
Concentrations and mass transport of pesticides and organic contaminants in the Mississippi River and some of its tributaries, 1987-89: U.S. Geological Survey Open-File Report 94-376, 169 p.
Pereira, W.E., and Rostad, C.E., 1990,
Occurrence, distributions, and transport of herbicides and their degradation products in the lower Mississippi River and its tributaries: Environmental Science and Technology, v. 24, no. 9, p. 1400-1406, doi:10.1021/es00079a015.
Pereira, W.E., Rostad, C.E., and Leiker, T.J., 1992,
Synthetic organic agrochemicals in the lower Mississippi River and its major tributaries--Distribution, transport and fate: Journal of Contaminant Hydrology, v. 9, p. 175-188, doi:10.1016/0169-7722(92)90057-L.
Pereira, W.E., Rostad, C.E., and Leiker, T.J., 1989,
Preliminary assessment of the fate and transport of synthetic organic agrochemicals in the lower Mississippi River and its tributaries, in Mallard, G.E., and Ragone, S.E., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the technical meeting, Phoenix, Arizona, September 26-30, 1988: U.S. Geological Survey Water-Resources Investigations Report 88-4220, p. 453-464.
Piper, D.Z., Ludington, S., Duval, J.S., and Taylor, H.E., 2006,
Geochemistry of bed and suspended sediment in the Mississippi river system--Provenance versus weathering and winnowing: Science of the Total Environment, v. 362, no. 1-3, p. 179-204, doi:10.1016/j.scitotenv.2005.05.041.
Piper, D.Z., Skorupa, J.P., Presser, T.S., Hardy, S.J., Hamilton, M.A., Huebner, M.A., and Gulbrandsen, R.A., 2000,
The Phosphoria Formation at the Hot Springs Mine in southeast Idaho--A source of trace elements to ground water, surface water, and biota: U.S. Geological Survey Open-File Report 00-050, 73 p.
Presser, T.S., and Luoma, S.N., 2009,
Modeling of selenium for the San Diego Creek watershed and Newport Bay, California: U.S. Geological Survey Open-File Report 2009-1114, 48 p.
Presser, T.S., and Piper, D.Z., 1997,
Mass balance approach to selenium cycling through the San Joaquin Valley, sources to river to bay, in Frankenberger, W., and Engberg, R.A., eds., Environmental Chemistry of Selenium: New York, Marcel Dekker Inc.
Pringle, C.M., Rowe, C.L., Triska, F.J., Fernandez, J.F., and West, J., 1993,
Landscape linkages between geothermal activity, solute composition, and ecological response in surface waters draining the Atlantic slope of Costa Rica: Limnology and Oceanography, v. 38, p. 753-774.
Pringle, C.M., and Triska, F.J., 2000,
Emergent biological patterns in streams resulting from surface-subsurface interactions at landscape scales, in Jones, J.B., and Mulholland, P.J., eds., Streams and Groundwaters: New York, Academic Press.
Pringle, C.M., and Triska, F.J., 1996,
Chapter 29 - Effects of nutrient enrichment on periphyton, in Hayer, F.R., and Lamberti, G.A., eds., Methods in Stream Ecology: San Diego, Academic Press, p. 607-624.
Puckett, L.J., and Triska, F.J., 1996,
USGS nitrogen cycling workshop: U.S. Geological Survey Open-File Report 96-477, 88 p.
Puckett, L.J., Zamora, C., Essaid, H., Wilson, J.T., Johnson, H.M., Brayton, M.J., and Vogel, J.R., 2008,
Transport and fate of nitrate at the ground-water/surface-water interface: Journal of Environmental Quality, v. 37, no. 3, p. 1,034-1,050, doi:10.2134/jeq2006.0550.

R

Rathbun, R.E., Shultz, D.J., Stephens, D.W., and Tai, D.Y., 1989,
Transport and fate of acetone in an outdoor model stream, Stennis Space Center near Bay St. Louis, Mississippi: U.S. Geological Survey Water-Resources Investigations Report 89-4141, 101 p.
Reddy, M.M., Schuster, P., Kendall, C., and Reddy, M.B., 2006,
Characterization of surface and ground-water δ18O seasonal variation and its use for estimating groundwater residence times: Hydrological Processes, v. 20, no. 8, p. 1753-1772, doi:10.1002/hyp.5953.
Rees, T.F., and Ranville, J.F., 1989,
Characterization of colloids in the Mississippi River and its major tributaries, in Mallard, G.E., and Ragone, S.E., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the technical meeting, Phoenix, Arizona, September 26-30, 1988: U.S. Geological Survey Water-Resources Investigations Report 88-4220, p. 513-522.
Rees, T.F., and Ranville, J.F., 1988,
Identification of colloids present at Sheeler Seeps, Whitewood Creek, South Dakota, in Mallard, G.E., ed., U.S. Geological Survey Toxic Substances Hydrology Program--Surface-Water Contamination--Proceedings of the technical meeting, Denver, Colorado, February 2-4, 1987: U.S. Geological Survey Open-File Report 87-764, p. 29-32.
Reilly, T.J., Walker, C.E., Baehr, A.L., Schrock, R.M., and Reinfelder, J.R., 2005,
Occurrence of diatoms in lakeside wells in northern New Jersey as an indicator of the effect of surface water on ground-water quality: U.S. Geological Survey Scientific Investigations Report 2005-5263, 13 p.
Rosenberry, D.O., Dean, W.E., Duff, J.H., LaBaugh, J.W., Reddy, M.M., Schuster, P.S., Striegl, R.G., Triska, F.J., and Winter, T.C., 2003,
Exchange of water, solutes, and nutrients at the sediment-water interface affects a northern Minnesota watershed at multiple scales, in Proceedings of the First Interagency Conference on Research in the Watersheds, Benson, Arizona, October 27-30, 2003: U.S. Department of Agriculture, Agricultural Research Service, p. 468-473.
Rostad, C.E., 1997,
Concentration and transport of chlordane and nonachlor associated with suspended sediment in the Mississippi River, May 1998 to June 1990: Archives of Environmental Contamination and Toxicology, v. 33, no. 4, p. 369-377, doi:10.1007/s002449900266.
Rostad, C.E., 1997,
From the 1998 drought to the 1993 flood--Transport of halogenated organic compounds with the Mississippi River suspended sediment at Thebes, Illinois: Environmental Science and Technology, v. 31, p. 1308-1312, doi:10.1021/es960513z.
Rostad, C.E., 1996,
Partitioning of lipophilic organic contaminants among suspended particulate, colloid, and dissolved phases in the Mississippi River: Golden, Colorado School of Mines, Ph.D. Thesis, 210 p.
Rostad, C.E., Bishop, L.M., Ellis, G.E., Leiker, T.J., Monsterleet, S.G., and Pereira, W.E., 2004,
Organic contaminants associated with suspended sediment collected during five cruises of the Mississippi River and its principal tributaries, May 1988 to June 1990: U.S. Geological Survey Open-File Report 93-360, 54 p.
Rostad, C.E., Bishop, L.M., Ellis, G.S., Leiker, T.J., Monsterleet, S.G., and Pereira, W.E., 1995,
Polychlorinated biphenyls and other synthetic organic contaminants associated with sediments and fish in the Mississippi River, in Meade, R.H., ed., Contaminants in the Mississippi River, 1987-92: U.S. Geological Survey Circular 1133, p. 102-113.
Rostad, C.E., Bishop, L.M., Pereira, W.E., and Leiker, T.J., 2004,
Data for selected organic contaminants in the Mississippi and Ohio Rivers near their confluence, June 1989 and May-June 1990: U.S. Geological Survey Open-File Report 93-371 (An alternative title for this numbered report is listed at http://pubs.usgs.gov/of/1993/ofr93-371/ ), 18 p.
Rostad, C.E., and Daniel, S.R., 2007,
Distribution of selected halogenated organic compounds among suspended particulate, colloid, and aqueous phases in the Mississippi River and major tributaries: Archives of Environmental Contamination and Toxicology, v. 53, no. 2, p. 151-158, doi:10.1007/s00244-005-0056-1.
Rostad, C.E., Leenheer, J.A., and Daniel, S.R., 1997,
Organic carbon and nitrogen content associated with colloids and suspended particulates from the Mississippi River and some of its tributaries: Environmental Science and Technology, v. 31, no. 11, p. 3218-3225, doi:10.1021/es970196b.
Rostad, C.E., Pereira, W.E., and Keiker, T.J., 1999,
Distribution and transport of selected anthropogenic liipophilic organic compounds associated with Mississippi River suspended sediment, 1989-1990: Archives of Environmental Contamination and Toxicology, v. 36, no. 3, p. 248-255, doi:10.1007/s002449900468.
Rostad, C.E., Pereira, W.E., and Leiker, T.J., 1994,
Distribution and transport of selected anthropogenic organic compounds on Mississippi River suspended sediment (U.S.A.), May/June 1988: Journal of Contaminant Hydrology, v. 16, p. 175-199, doi:10.1016/0169-7722(94)90051-5.
Rostad, C.E., Rees, T.F., and Daniel, S.R., 1998,
Colloid particle sizes in the Mississippi River and some of its tributaries from Minneapolis to below New Orleans: Hydrological Processes, v. 12, no. 1, p. 25-41, doi:10.1002/(SICI)1099-1085(199801)12:1<25::AID-HYP544>3.0.CO;2-T.
Rostad, C.E., Sullivan, J.F., Hrinko, D.E., Bishop, L.M., and Moody, J.A., 1997,
Organochlorine compounds (Chapter 3), in Moody, J.A., ed., Hydrologic sedimentologic, and chemical data describing surficial bed sediments and water in the navigation pools of the Upper Mississippi River, July 1991-April 1992: U.S. Geological Survey Open-File Report 95-708, p. 73-108.
Runkel, R.L., 2010,
One-dimensional transport with equilibrium chemistry (OTEQ)--A reactive transport model for streams and rivers: U.S. Geological Survey Techniques and Methods book 6, chapter B6, 102 p.
Runkel, R.L., 2007,
Toward a transport-based analysis of nutrient spiraling and uptake in streams: Limnology and Oceanography--Methods, v. 5, p. 50-62.
Runkel, R.L., 2002,
A new metric for determining the importance of transient storage: Journal of the North American Benthological Society, v. 21, no. 4, p. 529-543.
Runkel, R.L., 2000,
Using OTIS to model solute transport in streams and rivers: U.S. Geological Survey Fact Sheet 138-99, 4 p.
Runkel, R.L., 1998,
One dimensional transport with inflow and storage (OTIS)--A solute transport model for streams and rivers: U.S. Geological Survey Water-Resources Investigations Report 98-4018, 73 p.
Runkel, R.L., 1996,
Solution of the advection-dispersion equation--Continuous load of finite duration: Journal of Environmental Engineering, v. 122, no. 9, p. 830-832, doi:10.1061/(ASCE)0733-9372(1996)122:9(830).
Runkel, R.L., 1995,
Simulation models for conservative and nonconservative solute transport in streams, in Osterkamp, W.R., ed., Effects of scale on interpretation and management of sediment and water quality--Proceedings of the 1995 Meeting of the International Association of Hydrological Sciences, Boulder, Colorado, July 3-14, 1995: International Association of Hydrological Sciences IAHS Publication 225, p. 153-159.
Runkel, R.L., 1993,
Development and application of an equilibrium-based simulation model for reactive solute transport in small streams: Boulder, University of Colorado, unpublished Ph.D. dissertation, 202 p.
Runkel, R.L., and Bencala, K.E., 1995,
Transport of reacting solutes in rivers and streams, in Singh, V.P., ed., Environmental Hydrology: Dordrecht, The Netherlands, Kleuwer Academic Publishers, p. 137-164.
Runkel, R.L., Bencala, K.E., and Broshears, R.E., 1996,
An equilibrium-based simulation model for reactive solute transport in small streams, in Morganwalp, D.W., and Aronson, D.A., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the technical meeting, Colorado Springs, Colorado, September 20-24, 1993: U.S. Geological Survey Water-Resources Investigations Report 94-4015, v. 2, p. 775-780.
Runkel, R.L., Bencala, K.E., Broshears, R.E., and Chapra, S.C., 1996,
Reactive solute transport in streams--1, Development of an equilibrium-based model: Water Resources Research, v. 32, no. 2, p. 409-418, 95WR03106, doi:10.1029/95WR03106.
Runkel, R.L., Bencala, K.E., and Kimball, B.A., 1999,
Modeling solute transport and geochemistry in streams and rivers using OTIS and OTEQ, in Morganwalp, D.W., and Buxton, H.T., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the Technical Meeting, Charleston, South Carolina, March 8-12, 1999--Volume 1 of 3--Contamination from Hardrock Mining: U.S. Geological Survey Water-Resources Investigations Report 99-4018A, p. 109-118.
Runkel, R.L., and Broshears, R.L., 1992,
One-dimensional transport with inflow and storage (OTIS)--A solute transport model for small streams: Boulder, Colo., CADSWES, 1 p.
Runkel, R.L., and Chapra, S., 1993,
An efficient numerical solution of the transient storage equations for solute transport in small streams: Water Resources Research, v. 29, no. 1, p. 211-215, 92WR02217, doi:10.1029/92WR02217.
Runkel, R.L., and Chapra, S.C., 1994,
Reply to "Comment on an efficient numerical solution of the transient storage equations for solute transport in small streams" by Dawes and Short: Water Resources Research, v. 30, no. 10, p. 2863-2865, 94WR00986, doi:10.1029/94WR00986.
Runkel, R.L., and Kimball, B.A., 2002,
Evaluating remedial alternatives for an acid mine drainage stream--Application of a reactive transport model: Environmental Science and Technology, v. 36, no. 5, p. 1093-1101, doi:10.1021/es0109794.
Runkel, R.L., Kimball, B.A., McKnight, D.M., and Bencala, K.E., 1999,
Reactive solute transport in streams--A surface complexation approach for trace metal sorption: Water Resources Research, v. 35, no. 12, p. 3829-3840, 1999WR900259, doi:10.1029/1999WR900259.
Runkel, R.L., Kimball, B.A., Walton-Day, K., and Verplanck, P.L., 2007,
A simulation-based approach for estimating premining water quality--Red Mountain Creek, Colorado: Applied Geochemistry, v. 22, no. 9, p. 1899-1918, doi:10.1016/j.apgeochem.2007.03.054.
Runkel, R.L., Kimball, B.A., Walton-Day, K., and Verplanck, P.L., 2005,
Geochemistry of Red Mountain Creek, Colorado, under low-flow conditions, August 2002: U.S. Geological Survey Scientific Investigations Report 2005-5101, 78 p.
Runkel, R.L., McKnight, D.M., and Andrews, E.D., 1998,
Analysis of transient storage subject to unsteady flow--Diel flow variation in an Antarctic stream: Journal of North American Benthological Society, v. 17, no. 2, p. 143-154.
Runkel, R.L., McKnight, D.M., Bencala, K.E., and Chapra, S.C., 1996,
Reactive solute transport in streams--2, Simulation of a pH modification experiment: Water Resources Research, v. 32, no. 2, p. 419-430, 95WR03107, doi:10.1029/95WR03107.
Runkel, R.L., McKnight, D.M., and Rajaram, H., 2003,
Modeling hyporheic zone processes: Advances in Water Resources, v. 26, no. 9, p. 901-905, doi:10.1016/S0309-1708(03)00079-4.
Runkel, R.L., and Restrepo, P.J., 1993,
Solute transport modeling under unsteady flow regimes--An application of the Modular Modeling Sytem, in Hon, K., ed., Water management in the `90s--A Time for Innovation--Proceedings of the 20th Anniversary Conference of the Water Resource Planning and Management Division of the American Society of Civil Engineers, Seattle, Wash., May 1-5, 1993: Washington, D.C., American Society of Civil Engineers, p. 256-259.
Runkel, R.L., Walton-Day, K., Kimball, B.A., Verplanck, P.L., and Nimick, D.A., 2013,
Estimating instream constituent loads using replicate synoptic sampling, Peru Creek, Colorado: Journal of Hydrology, v. 489, p. 26-41, doi:10.1016/j.jhydrol.2013.02.031.

S

Schemel, L.E., and Cox, M.H., 2005,
Descriptions of the Animas River-Cement Creek confluence and mixing zone near Silverton, Colorado, during the late summers of 1996 and 1997: U.S. Geological Survey Open-File Report 2005-1064, 4 p (Online only).
Schemel, L.E., Cox, M.H., Kimball, B.A., and Bencala, K.E., 1999,
Partitioning of zinc between dissolved and colloidal phases in the Animas River near Silverton, Colorado, in Morganwalp, D.W., and Buxton, H.T., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the Technical Meeting, Charleston, South Carolina, March 8-12, 1999--Volume 1 of 3--Contamination from Hardrock Mining: U.S. Geological Survey Water-Resources Investigations Report 99-4018A, p. 63-66.
Schemel, L.E., Cox, M.H., Runkel, R.L., and Kimball, B.A., 2006,
Multiple injected and natural conservative tracers quantify mixing in a stream confluence affected by acid mine drainage near Silverton, Colorado: Hydrological Processes, v. 20, no. 13, p. 2727-2743, doi:10.1002/hyp.6081.
Schemel, L.E., Hager, S.W., and Childers, D., Jr., 1996,
The supply and carbon content of suspended sediment from the Sacramento River to San Francisco Bay--I. Carbon and nitrogen concentrations and transports, in Hollibaugh, J.T., ed., San Francisco Bay--The ecosystem: San Francisco, American Association for the Advancement of Science, Pacific Division, p. 217-236.
Schemel, L.E., Kimball, B.A., and Bencala, K.E., 2000,
Colloid formation and metal transport through two mixing zones affected by acid mine drainage near Silverton, Colorado: Applied Geochemistry, v. 15, no. 7, p. 1003-1018.
Schemel, L.E., Kimball, B.A., and Bencala, K.E., 1999,
Colloid formation and the transport of aluminum and iron in the Animas River near Silverton, Colorado, in Morganwalp, D.W., and Buxton, H.T., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the Technical Meeting, Charleston, South Carolina, March 8-12, 1999--Volume 1 of 3--Contamination from Hardrock Mining: U.S. Geological Survey Water-Resources Investigations Report 99-4018A, p. 59-62.
Schemel, L.E., Kimball, B.A., Runkel, R.L., and Cox, M.H., 2007,
Formation of mixed Al-Fe colloidal sorbent and dissolved-colloidal partitioning of Cu and Zn in the Cement Creek-Animas River confluence, Silverton, Colorado: Applied Geochemistry, v. 22, no. 7, p. 1467-1484, doi:10.1016/j.apgeochem.2007.02.010.
Schindler, J.E., and Krabbenhoft, D.P., 1998,
The hyporheic zone as a source of dissolved organic carbon and carbon gases to a temperate forested stream: Biogeochemistry, v. 43, no. 2, p. 157-174, doi:10.1023/A:1006005311257.
Schuster, P., Shanley, J., Marvin-Dipasquale, M., Reddy, M., Aiken, G., Roth, D., Taylor, H., Krabbenhoft, D., and DeWild, J., 2008,
Mercury and organic carbon dynamics during runoff episodes from a northeastern USA watershed: Water, Air, and Soil Pollution, v. 187, no. 1, p. 89-108, doi:10.1007/s11270-007-9500-3.
Schuster, P.F., Reddy, M.M., Aiken, G.R., and Shanley, J.B., 2004,
What effect does permafrost have on dissolved organic carbon transport to streams during snowmelt, in Wanty, R.B., and Seal, R.R., eds., Water-Rock Interaction, Proceedings of the Eleventh International Symposium on Water-Rock Interaction, Saratoga Springs, New York, July 2004: A.A. Balkema Publishers, v. 2, p. 1385-1389.
Scott, D.T., Gooseff, M.N., Bencala, K.E., and Runkel, R.L., 2003,
Automated calibration of a stream solute transport model--Implications for interpretation of biogeochemical parameters: Journal of the North American Benthological Society, v. 22, no. 4, p. 492-510.
Scott, D.T., Runkel, R.L., McKnight, D.M., Voelker, B.M., Kimball, B.A., and Carraway, E.R., 2003,
Transport and cycling of iron and hydrogen peroxide in a freshwater stream--Influence of organic acids: Water Resources Research, v. 39, no. 11, p. HWC 1-1 - HWC 1-14, 2002WR001768, doi:10.1029/2002WR001768.
Sebestyen, S.D., Boyer, E.W., Shanley, J.B., Kendall, C., Doctor, D.H., Aiken, G.R., and Ohte, N., 2008,
Sources, transformations, and hydrological processes that control stream nitrate and dissolved organic matter concentrations during snowmelt in an upland forest: Water Resources Research, v. 44, no. 12, p. 1-14, W12410, doi:10.1029/2008WR006983.
Shanley, J.B., Mayer, B., Mitchell, M.J., Michel, R.L., Bailey, S.W., and Kendall, C., 2005,
Tracing sources of streamwater sulfate during snowmelt using S and O isotope ratios of sulfate and 35S activity: Biogeochemistry, v. 76, p. 161-185, doi:10.1007/s10533-005-2856-9.
Sheibley, R.W., Duff, J.H., Jackman, A.P., and Triska, F.J., 2003,
Inorganic nitrogen transformations in the bed of the Shingobee River, Minnesota--Integrating hydrologic and biological processes using sediment perfusion cores: Limnology and Oceanography, v. 48, no. 3, p. 1129-1140.
Sheibley, R.W., Duff, J.H., Jackman, A.P., Triska, F.J., Warren, E., and Godsy, E.M., 2006,
Nitrate reduction in sediment perfusion cores from Pool 8, upper Mississippi River, La Crosse, Wisconsin, USA: Internationale Vereinigung fur Theoretische und Angewandte Limnologie, v. 29, p. 1289-1295.
Sheibley, R.W., Jackman, A.P., Duff, J.H., and Triska, F.J., 2003,
Numerical modeling of coupled nitrification-denitrification in sediment perfusion cores from the hyporheic zone of the Shingobee River, Minnesota: Advances in Water Resources, v. 26, no. 9, p. 977-987, doi:10.1016/S0309-1708(03)00088-5.
Shope, C.L., Xie, Y., and Gammons, C.H., 2006,
The influence of hydrous Mn-Zn oxides on diel cycling of Zn in an alkaline stream draining abandoned mine lands: Applied Geochemistry, v. 21, no. 3, p. 476-491, doi:10.1016/j.apgeochem.2005.11.004.
Slater, L.D., Ntarlagiannis, D., Day-Lewis, F.D., Mwakanyamale, K., Versteeg, R.J., Ward, A., Strickland, C., Johnson, C.D., and Jr., J.W.L., 2010,
Use of electrical imaging and distributed temperature sensing methods to characterize surface water-groundwater exchange regulating uranium transport at the Hanford 300 Area, Washington: Water Resources Research, v. 46, no. 10, W10533, doi:10.1029/2010WR009110.
Smith, J.A., Witkowski, P.J., and Chiou, C.T., 1988,
Partition of nonionic organic compounds in aquatic systems: Reviews of Environmental Contamination and Toxicology, v. 39, p. 465-473.
Smith, J.A., Witkowski, P.J., and Fusillo, T.V., 1987,
Manmade organic compounds in the surface waters of the United States--A review of current understanding: U.S. Geological Survey Circular 1007, 92 p.
Smith, J.D., Lambing, J.H., Nimick, D.A., Parret, C., Ramey, M., and Schafer, W., 1998,
Geomorphology, flood-plain tailings, and metal transport in the Upper Clark Fork Valley, Montana: U.S. Geological Survey Water-Resources Investigations Report 98-4170, 56 p.
Smith, K.S., Ranville, J.F., Macalady, D.L., and Rees, T.F., 1988,
Monodisperse colloids from an acid-mine-drainage impacted stream, in Preprints of Papers Presented at the Third Chemical Congress of North America and 195th ACS National Meeting, Division of Environmental Chemistry, Toronto, Ontario, June 5-10, 1988: Washington, D.C., American Chemical Society, v. 28, no. 1, p. 527-529.
Smith, R.L., Böhlke, J.K., Repert, D.A., and Hart, C.P., 2009,
Nitrification and denitrification in a midwestern stream containing high nitrate--In situ assessment using tracers in dome-shaped incubation chambers: Biogeochemistry, v. 96, no. 1, p. 189-208, doi:10.1007/s10533-009-9358-0.
Soenksen, P.J., 1996,
Transport of agricultural chemicals in surface flow, tileflow, and streamflow of Walnut Creek watershed near Ames, Iowa, April 1991-September 1993: U.S. Geological Survey Water-Resources Investigations Report 96-4017, 41 p.
Spencer, R.G.M., Aiken, G.R., Butler, K.D., Dornblaser, M.M., Striegl, R.G., and Hernes, P.J., 2009,
Utilizing chromophoric dissolved organic matter measurements to derive export and reactivity of dissolved organic carbon exported to the Arctic Ocean--A case study of the Yukon River, Alaska: Geophysical Research Letters, v. 36, no. 6, p. L06401, doi:10.1029/2008gl036831.
Spencer, R.G.M., Aiken, G.R., Wickland, K.P., Striegl, R.G., and Hernes, P.J., 2008,
Seasonal and spatial variability in dissolved organic matter quantity and composition from the Yukon River basin, Alaska: Global Biogeochemical Cycles, v. 22, no. 4, p. GB4002, doi:10.1029/2008gb003231.
Squillace, P.J., and Engberg, R.A., 1988,
Surface-water quality of the Cedar River basin, Iowa-Minnesota, with emphasis on the occurrence and transport of herbicides, May 1984 through November 1985: U.S. Geological Survey Water-Resources Investigations Report 88-4060, 81 p.
Squillace, P.J., and Thurman, E.M., 1992,
Herbicide transport in rivers--Importance of hydrology and geochemistry in nonpoint-source contamination: Environmental Science and Technology, v. 26, no. 3, p. 538-545, doi:10.1021/es00027a015.
Squillace, P.J., and Thurman, E.M., 1989,
Herbicide transport in the Cedar River, Iowa--Importance of hydrology and geochemistry in nonpoint-source contamination, in Mallard, G.E., and Ragone, S.E., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the technical meeting, Phoenix, Arizona, September 26-30, 1988: U.S. Geological Survey Water-Resources Investigations Report 88-4220, p. 635.
Starner, K., Kuivila, K.M., Jennings, B.M., and Moon, G.E., 1999,
Degradation rates of six pesticides in water from the Sacramento River, California, in Morganwalp, D.W., and Buxton, H.T., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the Technical Meeting, Charleston, South Carolina, March 8-12, 1999--Volume 2 of 3--Contamination of Hydrologic Systems and Related Ecosystems: U.S. Geological Survey Water-Resources Investigations Report 99-4018B, p. 89-97.
Stets, E.G., Striegl, R.G., and Aiken, G.R., 2010,
Dissolved organic carbon export and internal cycling in small, headwater lakes: Global Biogeochemical Cycles, v. 24, no. 4, p. GB4008, doi:10.1029/2010gb003815.
Stream Solute Workshop, 1990,
Concepts and methods for assessing solute dynamics in stream ecosystems: Journal of the North American Benthological Society, v. 9, p. 95-119.
Striegl, R.G., Aiken, G.R., Dornblaser, M.M., Raymond, P.A., and Wickland, K.P., 2005,
A decrease in discharge-normalized DOC export by the Yukon River during summer through autumn: Geophysical Research Letters, v. 32, L21413, doi:10.1029/2005GL024413.
Sunderland, E.M., Dalziel, J., Heyes, A., Branfireun, B.A., Krabbenhoft, D.P., and Gobas, F.A.P.C., 2010,
Response of a macrotidal estuary to changes in anthropogenic mercury loading between 1850 and 2000: Environmental Science and Technology, v. 44, no. 5, p. 1,698-1,704, doi:10.1021/es9032524.

T

Tabor, C.F., 1993,
The occurrence and fate of linear alkylbenzene sulfonate in the Mississippi River--A molecular indicator of sewage contamination: Boulder, University of Colorado, Master's Thesis, 78 p.
Tabor, C.F., and Barber, L.B., 1996,
Fate of linear alkylbenzene sulfonate in the Mississippi River: Environmental Science and Technology, v. 30, no. 1, p. 161-171, doi:10.1021/es950210p.
Taylor, H.E., Antweiler, R.C., Alpers, C.N., Roth, D.A., Brinton, T.I., Cain, D.J., Ball, J.W., Unruh, D.M., and Dileanis, P.D., 2000,
Quality assurance and quality control, in Alpers, C.N., Taylor, H.E., and Domagalski, J.J., eds., Metals transport in the Sacramento River, California, 1996-97--Volume 1. Methods and data: U.S. Geological Survey Water-Resources Investigations Report 99-4286, p. 38-61.
Taylor, H.E., Antweiler, R.C., Roth, D.A., Brinton, T.I., Peart, D.B., and Healy, D.F., 2001,
The occurrence and distribution of selected trace elements in the upper Rio Grande and tributaries in Colorado and northern New Mexico: Archives of Environmental Contamination and Toxicology, v. 41, p. 410-426, doi:10.1007/s002440010267.
Thompson, B., Adelsbach, T., Brown, C., Hunt, J., Kuwabara, J., Neale, J., Ohlendorf, H., Schwarzbach, S., Spies, R., and Taberski, K., 2007,
Biological effects of anthropogenic contaminants in the San Francisco Estuary: Environmental Research, v. 105, no. 1, p. 156-174, doi:10.1016/j.envres.2006.10.005.
Thurman, E.M., and Cromwell, A.E., 2000,
Atmospheric transport, deposition, and fate of triazine herbicides and their metabolites in pristine areas at Isle Royale National Park: Environmental Science and Technology, v. 34, no. 15, p. 3079-3085, doi:10.1021/es000995l.
Thurman, E.M., Goolsby, D.A., Aga, D.S., Pomes, M.L., and Meyer, M.T., 1996,
Occurrence of alachlor and its sulfonated metabolite in rivers and reservoirs of the midwestern U.S.--The importance of sulfonation in the transport of chloroacetanilide herbicides: Environmental Science and Technology, v. 30, no. 2, p. 569-574, doi:10.1021/es950341q.
Thurman, E.M., Meyer, M.T., Mills, M.S., Zimmerman, L.R., Perry, C.A., and Goolsby, D.A., 1994,
Formation and transport of deethylatrazine and deisopropylatrazine in surface water: Environmental Science and Technology, v. 28, no. 13, p. 2267-2277, doi:10.1021/es00062a010.
Thurman, E.M., Mills, M.S., and Meyer, M.T., 1996,
Chemistry, degradation, and transport of triazine herbicide metabolites in surface water, in Morganwalp, D.W., and Aronson, D.A., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the technical meeting, Colorado Springs, Colorado, September 20-24, 1993: U.S. Geological Survey Water-Resources Investigations Report 94-4015, v. 1, p. 455-462.
Tobias, C., and Böhlke, J.K., 2011,
Biological and geochemical controls on diel dissolved inorganic carbon cycling in a low-order agricultural stream--Implications for reach scales and beyond: Chemical Geology, v. 283, no. 1-2, p. 18-30, doi:10.1016/j.chemgeo.2010.12.012.
Triska, F.J., 2006,
Biogeochemical processes in river systems--Part 1--Key biochemical processes in river systems, in Shiklomanov, I.A., ed., Encyclopedia of Water Sciences, Engineering and Technology Resources, in Encyclopedia of Life Support Systems: EOLSS Publishers Ltd.
Triska, F.J., and Duff, J.H., 1997,
Sediment associated nitrification and denitrification potentials at the interface between a bankside ground water seep and the channel of the Shingobee River, in Winter, T.C., ed., Interdisciplinary research initiative--Hydrological and biogeochemical research in the Shingobee River headwaters area, north-central Minnesota: U.S. Geological Survey Water-Resources Investigations Report 96-4215, p. 155-160.
Triska, F.J., Duff, J.H., and Avanzino, R.J., 1993,
Patterns of hydrological exchange and nutrient transformation in the hyporheic zone of a gravel bottom stream--Examining terrestrial aquatic linkages: Freshwater Biology, v. 29, p. 259-274.
Triska, F.J., Duff, J.H., and Avanzino, R.J., 1993,
The role of water exchange between a stream channel and its hyporheic zone in nitrogen cycling at the terrestrial-aquatic interface: Hydrobiologia, v. 251, p. 167-184.
Triska, F.J., Duff, J.H., Avanzino, R.J., and Jackman, A.P., 1997,
Physical and chemical properties at the interface between a bank-side ground water seep and the channel of the Shingobee River, in Winter, T.C., ed., Interdisciplinary Research Initiative--Hydrological and biogeochemical research in the Shingobee River headquarters area, north-central Minnesota: U.S. Geological Survey Water-Resources Investigations Report 96-4215, p. 149-154.
Triska, F.J., Duff, J.H., Warren, E., Godsy, E.M., Jackman, A.P., and Avanzino, R.J., 2006,
High and low flow nitrate distribution and its implications for nitrate retention in Navigation Pool 8, Upper Mississippi River (UMR), and in a high nitrate tributary, the Root River, USA, in Jones, J., ed., XXIX Congress of the International Association of Theoretical and Applied Limnology, Lahti, Finland, August 8-14, 2004: Verhandlungen Internationale Vereinigung für Theoretische und Angewandte Limnologie, v. 29, no. 4, p. 1,729-1,735, ISBN:978-3-510-54068-6.
Triska, F.J., Jackman, A.P., Duff, J.H., and Avanzino, R.J., 2000,
Subchannel dispersion and velocity beneath a relict beaver dam, Shingobee River, Minnesota, USA--Implications for nutrient cycling: Internationale Vereinigung fur Theoretische und Angewandte Limnologie, v. 27, p. 463-467.
Triska, F.J., Jackman, A.P., Duff, J.H., and Avanzino, R.J., 1994,
Ammonium sorption to channel and riparian sediments--A transient storage pool for dissolved inorganic nitrogen: Biogeochemistry, v. 26, p. 67-83.
Triska, F.J., Kennedy, V.C., Avanzino, R.J., and Stanley, K.C., 1995,
Long-term effects of clearcutting and short-term impacts of storms on inorganic nitrogen uptake and regeneration in a small stream at summer base flow, in Nolan, K.M., Kelsey, H.M., and Marron, D.C., eds., Geomorphic processes and aquatic habitat in the Redwood Creek Basin, northwestern California: U.S. Geological Survey Professional Paper 1454, p. V1-V13.
Triska, F.J., Pringle, C.M., Zellweger, G.W., Duff, J.H., and Avanzino, R.J., 1993,
Dissolved inorganic nitrogen composition, transformation, retention, and transport in naturally phosphate-rich and phosphate-poor tropical streams: Canadian Journal of Fisheries and Aquatic Sciences, v. 50, p. 665-675.

V

Van Metre, P.C., Callender, E., and Fuller, C.C., 1997,
Historical trends in organochloride compounds in river basins identified using sediment cores from reservoirs: Environmental Science and Technology, v. 31, no. 8, p. 2339-2344, doi:10.1021/es960943p.
Van Metre, P.C., Horowitz, A.J., Mahler, B.J., Foreman, W.T., Fuller, C.C., Burkhardt, M.R., Elrick, K.A., Furlong, E.T., Skrobialowski, S.C., Smith, J.J., Wilson, J.T., and Zaugg, S.D., 2006,
Effects of Hurricanes Katrina and Rita on the chemistry of bottom sediments in Lake Pontchartrain, Louisiana, USA: Environmental Science and Technology, v. 40, no. 22, p. 6894-6902, doi:10.1021/es060933g.
Van Metre, P.C., Wilson, J.T., Callender, E., and Fuller, C., 1998,
Similar rates of decrease of persistent, hydrophobic contaminants in riverine systems: Environmental Science and Technology, v. 32, p. 3312-3317, doi:10.1021/es9801902.
Van Metre, P.C., Wilson, J.T., Horowitz, A.J., Skrobialowski, S.C., Foreman, W.T., Fuller, C.C., Burkhardt, M.R., Elrick, K.A., Mahler, B.J., Smith, J.J., and Zaugg, S.D., 2007,
Chemical constituents in sediment in Lake Pontchartrain and in street mud and canal sediment in New Orleans, Louisiana, following Hurricanes Katrina and Rita, 2005: U.S. Geological Survey Data Series 206, 159 p.
Venkatesan, A.K., Pycke, B.F.G., Barber, L.B., Lee, K.E., and Halden, R.U., 2012,
Occurrence of triclosan, triclocarban, and its lesser chlorinated congeners in Minnesota freshwater sediments collected near wastewater treatment plants: Journal of Hazardous Materials, v. 229-230, p. 29-35, doi:10.1016/j.jhazmat.2012.05.049.
Verplanck, P.L., Nordstrom, D.K., and McCleskey, R.B., 2005,
Questa baseline and pre-mining ground-water quality investigation. 20. Water chemistry trends of the Red River, Taos County, New Mexico, with data from selected seeps, tributaries, and snow, 2000-2004: U.S. Geological Survey Scientific Investigations Report 2006-5028.
Verplanck, P.L., Taylor, H.E., Nordstrom, D.K., and Barber, L.B., 2005,
Aqueous stability of gadolinium in surface waters receiving sewage treatment plant effluent, Boulder Creek, Colorado: Environmental Science and Technology, v. 39, no. 18, p. 6923-6929, doi:10.1021/es048456u.
Verstraeten, I., Meyer, M.T., Skopp, J., Speth, T., Obrist, J.G., and Vogel, J.R., 2003,
Sources, temporal variations, and fate and transport of selected endocrine disruption compounds and pharmaceuticals, Nebraska, USA, in Proceedings of the 3rd International Conference on Pharmaceuticals and Endocrine Disrupting Chemicals in Water, Minneapolis, Minnesota, March 19-21, 2003: National Ground Water Association, p. 292, CD-ROM.
Volkmar, E.C., Dahlgren, R.A., Stringfellow, W.T., Henson, S.S., Borglin, S.E., Kendall, C., and Van Nieuwenhuyse, E.E., 2011,
Using lagrangian sampling to study water quality during downstream transport in the San Luis Drain, California, USA: Chemical Geology, v. 283, no. 1-2, p. 68-77, doi:10.1016/j.chemgeo.2011.01.029.

W

Wagner, B.J., and Harvey, J.W., 1999,
Evaluating the ability of tracer tests to quantify reactive solute transport in stream-aquifer systems, in Morganwalp, D.W., and Buxton, H.T., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the Technical Meeting, Charleston, South Carolina, March 8-12, 1999--Volume 1 of 3--Contamination from Hardrock Mining: U.S. Geological Survey Water-Resources Investigations Report 99-4018A, p. 201-209.
Wagner, B.J., and Harvey, J.W., 1996,
Solute-transport parameter estimation for an injection experiment at Pinal Creek, Arizona, in Morganwalp, D.W., and Aronson, D.A., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the technical meeting, Colorado Springs, Colorado, September 20-24, 1993: U.S. Geological Survey Water-Resources Investigations Report 94-4015, v. 2, p. 1081-1087.
Walton-Day, K., Flynn, J.L., Kimball, B.A., and Runkel, R.L., 2005,
Mass loading of selected major and trace elements in Lake Fork Creek near Leadville, Colorado, September-October 2001: U.S. Geological Survey Scientific Investigations Report 2005-5151, 46 p.
Walton-Day, K., Healy, R.W., and Smith, B., 2006,
Assessment of remediation of fluvial tailings deposits in the upper Arkansas River Basin, Lake County, Colorado: U.S. Geological Survey Administrative Report, 97 p.
Walton-Day, K., Kimball, B.A., and Runkel, R.L., 2002,
The use of mass-loading studies and solute transport modeling to assist in the development of TMDL's for streams affected by mine drainage, in Workshop Notebook, Colorado Department of Health and Environment, 10th National Nonpoint Source Monitoring Workshop, Breckenridge, Colorado, September 8-12, 2002, 5 p.
Walton-Day, K., Ortiz, R.F., and von Guerard, P.B., 1995,
Water-transport--A powerful way to move metals, in King, T.V.V., ed., Environmental considerations of active and abandoned mine lands--Lessons from Summitville: U.S. Geological Survey Bulletin 2220, p. 20-23.
Walton-Day, K., Runkel, R.L., Kimball, B.A., and Bencala, K.E., 2000,
Application of the solute-transport models OTIS and OTEQ and implications for remediation in a watershed affected by acid mine drainage, Cement Creek, Animas River basin, Colorado, in Proceedings from the Fifth International Conference on Acid Rock Drainage, Denver, Colorado, May 21-24, 2000: Littleton, Colo., Society for Mining, Metallurgy, and Exploration, p. 389-399.
Walton-Day, K., Runkel, R.L., Kimball, B.A., and Bencala, K.E., 1999,
Application of the solute-transport models OTIS and OTEQ and implications for remediation in a watershed affected by acid mine drainage, Cement Creek, Animas River Basin, Colorado, in Morganwalp, D.W., and Buxton, H.T., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the Technical Meeting, Charleston, South Carolina, March 8-12, 1999--Volume 1 of 3--Contamination from Hardrock Mining: U.S. Geological Survey Water-Resources Investigations Report 99-4018A, p. 37-46.
Walvoord, M.A., and Striegl, R.G., 2007,
Increased groundwater to stream discharge from permafrost thawing in the Yukon River basin--Potential impacts on lateral export of carbon and nitrogen: Geophysical Research Letters, v. 34, no. 12, L12402, doi:10.1029/2007GL030216.
Wankel, S.D., Kendall, C., Francis, C.A., and Paytan, A., 2006,
Nitrogen sources and cycling in the San Francisco Bay estuary--A nitrate dual isotopic composition approach: Limnology and Oceanography, v. 51, no. 4, p. 1654-1664 (Abstract).
Wanty, R.B., Verplanck, P.L., Tuttle, M., Runkel, R.L., Berger, B.R., and Kimball, B.A., 2004,
Resolving natural and anthropogenic sources of solutes to a watershed from historic mining, in Wanty, R.B., and Seal III, R.R., eds., Proceedings of the Eleventh International Symposium of Water-Rock Interaction WRI-II, Saratoga Springs, New York, June 27-July 2, 2004: A.A. Balkema, p. 1659-1663.
Ward, A.S., Gooseff, M.N., and Singha, K., 2010,
Characterizing hyporheic transport processes--Interpretation of electrical geophysical data in coupled stream-hyporheic zone systems during solute tracer studies: Advances in Water Resources, v. 33, no. 11, p. 1320-1330, doi:10.1016/j.advwatres.2010.05.008.
Ward, A.S., Payn, R.A., Gooseff, M.N., McGlynn, B.L., Bencala, K.E., Kelleher, C.A., Wondzell, S.M., and Wagener, T., 2013,
Variations in surface water-ground water interactions along a headwater mountain stream--Comparisons between transient storage and water balance analyses: Water Resources Research, v. 49, no. 6, p. 3359-3374, doi:10.1002/wrcr.20148.
Ward, A.S., Payn, R.A., Gooseff, M.N., McGlynn, B.L., Bencala, K.E., Kelleher, C.A., Wondzell, S.M., and Wagener, T., 2013,
Variations in surface water-ground water interactions along a headwater mountain stream--Comparisons between transient storage and water balance analyses: Water Resources Research, v. 49, no. 6, p. 3359-3374, doi:10.1002/wrcr.20148.
Warren, E., Godsy, E.M., Duff, J.H., Triska, F.J., and Jackman, A.P., 2006,
Nitrate reduction and microbial numbers in upper Mississippi River sediments, Pool 8, La Crosse, Wisconsin, USA: Verhandlungen Internationale Vereinigung fur Theoretische und Angewandte Limnologie, v. 29, p. 1578-1582.
Webster, J.G., Nordstrom, D.K., and Smith, K.S., 1994,
Transport and natural attenuation of Cu, Zn, As, and Fe in the acid mine drainage of Leviathan and Bryant Creeks, in Alpers, C.N., and Blowes, D.W., eds., Environmental geochemistry of sulfide oxidation: Washington, D.C., American Chemical Society Symposium Series 550, p. 244-260.
Wentz, D.A., Bonn, B.A., Carpenter, K.D., Hinkle, S.R., Janet, M.L., Rinella, F.A., Uhrich, M.A., Waite, L.R., Laenen, A., and Bencala, K.E., 1998,
Water quality in the Willamette Basin, Oregon, 1991-95: U.S. Geological Survey Circular 1161, 34 p.
Witkowski, P.J., Smith, J.A., Fusillo, T.V., and Chiou, C.T., 1987,
A review of surface-water sediment fractions and their interactions with persistent manmade organic compounds: U.S. Geological Survey Circular 993, 39 p.
Wright, W.G., Kimball, B.A., and Runkel, R.L., 2007,
Effects of the May Day Mine site on stream-water quality in the Cement Creek Basin, August 2000, in Church, S.E., von Guerard, P., and Finger, S.E., eds., Integrated Investigations of Environmental Effects of Historical Mining in the Animas River Watershed, San Juan County, Colorado: U.S. Geological Survey Professional Paper 1651, v. 2, p. 943-972.
Writer, J.H., 1992,
Sewage contamination in the Upper Mississippi River as measured by the fecal sterol coprostanol: Boulder, University of Colorado, Master's Thesis, 99 p.
Writer, J.H., Leenheer, J.A., Barber, L.B., Amy, G.L., and Chapra, S.C., 1995,
Sewage contamination in the Upper Mississippi River as measured by the fecal sterol, coprostanol: Water Research, v. 29, no. 6, p. 1427-1436, doi:10.1016/0043-1354(94)00304-P.
Writer, J.H., Ryan, J.N., Keefe, S.H., and Barber, L.B., 2012,
Fate of 4-nonylphenol and 17β-estradiol in the Redwood River of Minnesota: Environmental Science and Technology, v. 46, no. 2, p. 860-868, doi:10.1021/es2031664.

Z

Zellweger, G.W., Bencala, K.E., Kimball, B.A., and McKnight, D.M., 1989,
Evaluation of lithium, sodium, chloride, and sulfate as tracers to investigate hydrologic aspects of acidic, metal-rich streams, in Mallard, G.E., and Ragone, S.E., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the technical meeting, Phoenix, Arizona, September 26-30, 1988: U.S. Geological Survey Water-Resources Investigations Report 88-4220, p. 609.
Zellweger, G.W., Bencala, K.E., McKnight, D.M., Hirsch, R.M., and Kimball, B.A., 1988,
Practical aspects of tracer experiments in acidic, metal enriched streams, in Mallard, G.E., ed., U.S. Geological Survey Toxic Substances Hydrology Program--Surface-Water Contamination--Proceedings of the technical meeting, Denver, Colorado, February 2-4, 1987: U.S. Geological Survey Open-File Report 87-764, p. 125-130.

A | B | C | D | E | F | G | H | J | K
L | M | N | O | P | R | S | T | V | W | Z

There are 463 publications in this section of the bibliography. The above list is sorted by author. The Toxics Bibliographic Data Base was last updated on 7/24/14.

| Sorted by Author | Sort by Year | Sort by Title | Sort by Publication Type | Only On-Line Reports | Search | Contents |


Get Acrobat

The page either contains links to .pdf files or links to non-USGS pages that might have links to .pdf files. .pdf files can be viewed with Adobe Reader®.
You can download Adobe Reader® for free.

USGS Home Water Climate Change Science Systems Ecosystems Energy and Minerals Environmental Health Hazards

Accessibility FOIA Privacy Policies and Notices

Take Pride in America logo USA.gov logo U.S. Department of the Interior | U.S. Geological Survey
URL: http://toxics.usgs.gov/bib/bib-swater-ctrans.html
Page Contact Information:
Page Last Modified: Wednesday, 07-May-2014 15:21:27 EDT